Rn01526225_m1

• Gene Symbol: Gtf2h5
• Gene Name: general transcription factor IIH, polypeptide 5
• Gene Aliases: RGD1560991
• Chromosome Location: Chr.1: 46978340 - 46985032 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gtf2h5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001126088.1	NP_001119560.1	2 - 3	222		110
	XM_006227894.1	XP_006227956.1	2 - 3	183		110
GenBank mRNA	FQ212207.1	-		144		110

More Information

Additional Information:

This assay is in the 5'UTR region of the NM_001126088.1, XM_006227894.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

RNA metabolism protein, nucleic acid metabolism protein, general transcription factor

Gene Ontology Categories:

Process(es)

nucleotide-excision repair
nucleotide-excision repair, preincision complex assembly
regulation of transcription, DNA-templated
transcription elongation from RNA polymerase I promoter
rRNA processing
biological_process
cellular response to gamma radiation

Function(s)

rDNA binding
molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P813893	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P030539	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	158801	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	25525	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	616572	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	914214	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	186843	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	71437	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P813893	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P030539	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P813893	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P030539	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P030539	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P813893	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P813893	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10702862	-	-
Affymetrix Rat Gene 1.0 ST Array	10702861	-	-
Affymetrix Rat Gene 1.1 ST Array	10702859	-	-
Rat Genome 230 2.0 Array	1367509_PM_at	-	-
Rat Genome 230 2.0 Array	1367509_at	-	-
Rat Genome 230 2.0 Array	1384085_at	-	-
Rat Genome 230 2.0 Array	1384085_PM_at	-	-
Affymetrix HT Rat Focus Array	1367509_at	-	-
Affymetrix HT Rat Focus Array	1367509_PM_at	-	-
Affymetrix HT Rat Focus Array	1384085_at	-	-
Affymetrix HT Rat Focus Array	1384085_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100002957.rn.1	TC0100000485.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100002963.rn.1	TC0100000485.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100002958.rn.1	TC0100000485.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100002967.rn.1	TC0100000485.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100002962.rn.1	TC0100000485.rn.1	RTA TC
Rat Expression Set 230	1367509_PM_at	-	-
Rat Expression Set 230	1367509_at	-	-
Rat Expression Set 230	1384085_at	-	-
Rat Expression Set 230	1367509_PM_at	-	-
Rat Expression Set 230	1367509_at	-	-
Rat Expression Set 230	1384085_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10702859	-	-
Rat Genome U34 Set	rc_AI231812_at	-	-
Rat Genome U34 Set	rc_AI237648_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21581558	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1373599	-	-