Rn01527164_g1

• Gene Symbol: Slc39a5
• Gene Name: solute carrier family 39 (zinc transporter), member 5
• Gene Aliases: -
• Chromosome Location: Chr.7: 2813875 - 2819906 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Slc39a5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108728.1	NP_001102198.1	10 - 11	1836		142
	XM_006240766.2	XP_006240828.1	11 - 12	1956		142
GenBank mRNA	FQ220010.1	-	7 - 8	931		142

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001991.rn.1

• Set Membership: Amplicon length greater than or equal to 101, Transporter, 3' Most, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

secondary carrier transporter

Gene Ontology Categories:

Process(es)

eye development
metal ion transport
BMP signaling pathway
cellular response to zinc ion starvation
positive regulation of mRNA splicing, via spliceosome
transmembrane transport

Function(s)

metal ion transmembrane transporter activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P043614	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	545741	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	505929	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	372492	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	559764	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	506669	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	163093	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P043614	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P043614	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P043614	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P389963	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	30188	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10899766	-	-
Affymetrix Rat Gene 1.0 ST Array	10899772	-	-
Affymetrix Rat Gene 1.0 ST Array	10899770	-	-
Affymetrix Rat Gene 1.0 ST Array	10899767	-	-
Affymetrix Rat Gene 1.0 ST Array	10899769	-	-
Affymetrix Rat Gene 1.0 ST Array	10899765	-	-
Affymetrix Rat Gene 1.0 ST Array	10899773	-	-
Affymetrix Rat Gene 1.0 ST Array	10899771	-	-
Affymetrix Rat Gene 1.0 ST Array	10899774	-	-
Affymetrix Rat Gene 1.0 ST Array	10899768	-	-
Affymetrix Rat Gene 1.1 ST Array	10899764	-	-
Rat Genome 230 2.0 Array	1377898_at	-	-
Rat Genome 230 2.0 Array	1390179_PM_at	-	-
Rat Genome 230 2.0 Array	1390179_at	-	-
Rat Genome 230 2.0 Array	1377898_PM_at	-	-
Affymetrix HT Rat Focus Array	1377898_PM_at	-	-
Affymetrix HT Rat Focus Array	1377898_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700015489.rn.1	TC0700001991.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700015490.rn.1	TC0700001991.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700015493.rn.1	TC0700001991.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700015492.rn.1	TC0700001991.rn.1	RTA TC
Rat Expression Set 230	1377898_at	-	-
Rat Expression Set 230	1377898_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10899764	-	-
Rat Genome U34 Set	rc_AI169113_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21766460	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1361348	-	-