Rn01527170_g1

• Gene Symbol: Slc39a5
• Gene Name: solute carrier family 39 (zinc transporter), member 5
• Gene Aliases: -
• Chromosome Location: Chr.7: 2813875 - 2819906 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Slc39a5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108728.1	NP_001102198.1	6 - 7	1316		98
	XM_006240760.2	XP_006240822.1	7 - 8	1221		98
	XM_006240761.2	XP_006240823.1	7 - 8	1233		98
	XM_006240762.2	XP_006240824.1	8 - 9	1341		98
	XM_006240763.2	XP_006240825.1	8 - 9	1329		98
	XM_006240764.2	XP_006240826.1	6 - 7	1125		98
	XM_006240766.2	XP_006240828.1	7 - 8	1436		98
	XM_006240767.2	XP_006240829.1	5 - 6	885		98
	XM_008765027.1	XP_008763249.1	7 - 8	1255		98
	XM_008765028.1	XP_008763250.1	7 - 8	1221		98
GenBank mRNA	FQ220010.1	-	3 - 4	411		98

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001991.rn.1

• Set Membership: Amplicon length between 86 and 100, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

eye development
metal ion transport
BMP signaling pathway
cellular response to zinc ion starvation
positive regulation of mRNA splicing, via spliceosome
transmembrane transport

Function(s)

metal ion transmembrane transporter activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0700015500.rn.1	TC0700001991.rn.1	RTA TC