Rn01527171_g1

• Gene Symbol: Slc39a5
• Gene Name: solute carrier family 39 (zinc transporter), member 5
• Gene Aliases: -
• Chromosome Location: Chr.7: 2813875 - 2819906 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Slc39a5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108728.1	NP_001102198.1	7 - 8	1403		65
	XM_006240760.2	XP_006240822.1	8 - 9	1308		65
	XM_006240761.2	XP_006240823.1	8 - 9	1320		65
	XM_006240762.2	XP_006240824.1	9 - 10	1428		65
	XM_006240763.2	XP_006240825.1	9 - 10	1416		65
	XM_006240764.2	XP_006240826.1	7 - 8	1212		65
	XM_006240766.2	XP_006240828.1	8 - 9	1523		65
	XM_006240767.2	XP_006240829.1	6 - 7	972		65
	XM_008765027.1	XP_008763249.1	8 - 9	1342		65
	XM_008765028.1	XP_008763250.1	8 - 9	1308		65
GenBank mRNA	FQ220010.1	-	4 - 5	498		65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001991.rn.1

• Set Membership: Amplicon length less than or equal to 70, Transporter, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

secondary carrier transporter

Gene Ontology Categories:

Process(es)

eye development
metal ion transport
BMP signaling pathway
cellular response to zinc ion starvation
positive regulation of mRNA splicing, via spliceosome
transmembrane transport

Function(s)

metal ion transmembrane transporter activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0700015499.rn.1	TC0700001991.rn.1	RTA TC