Rn01527304_m1

Gene Symbol:

LOC103690064 Dcp2 LOC100909830

Gene Name:

m7GpppN-mRNA hydrolase-like

decapping mRNA 2

mRNA-decapping enzyme 2-like

Gene Aliases:

-

RGD1562909

-

Chromosome Location:

Chr.18: 35849655 - 35883568 on Build Rnor_6.0

Chromosome Location:

Chr.18: 35489274 - 35671676 on Build Rnor_6.0

Chromosome Location:

Chr.18: 78577303 - 78610463 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

-

Assay Details

Gene Symbol: LOC103690064
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008772178.1	XP_008770400.1	8 - 9	1382		65

Gene Symbol: Dcp2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001170469.1	NP_001163940.1	10 - 11	1242		65

Gene Symbol: LOC100909830
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008772216.1	XP_008770438.1	8 - 9	3385		65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1800000412.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
mRNA catabolic process
metabolic process
histone mRNA catabolic process

Function(s)

RNA binding
hydrolase activity
manganese ion binding
m7G(5')pppN diphosphatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P013802	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P013802	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P013802	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P013802	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P457169	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.1 ST Array	10801494	-	-
Affymetrix Rat Clariom S Assay	PSR1800003105.rn.1	TC1800000412.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800003104.rn.1	TC1800000412.rn.1	RTA TC

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365197	-	-