Rn01527305_m1

Gene Symbol:

LOC103690064 Dcp2 LOC100909830 LOC100912393

Gene Name:

m7GpppN-mRNA hydrolase-like

decapping mRNA 2

mRNA-decapping enzyme 2-like

mRNA-decapping enzyme 2-like

Gene Aliases:

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RGD1562909

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Chromosome Location:

Chr.18: 35849655 - 35883568 on Build Rnor_6.0

Chromosome Location:

Chr.18: 35489274 - 35671676 on Build Rnor_6.0

Chromosome Location:

Chr.18: 78577303 - 78610463 on Build Rnor_6.0

Chromosome Location:

Chr.9: 3940949 - 3965961 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

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Assay Details

Gene Symbol: LOC103690064
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008772178.1	XP_008770400.1	5 - 6	1081		98

Gene Symbol: Dcp2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001170469.1	NP_001163940.1	7 - 8	941		98

Gene Symbol: LOC100909830
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008772216.1	XP_008770438.1	5 - 6	3084		98

Gene Symbol: LOC100912393
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_006244683.2	XP_006244745.1	7 - 8	954		98

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1800000412.rn.1

• Set Membership: Amplicon length between 86 and 100, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
mRNA catabolic process
metabolic process
histone mRNA catabolic process

Function(s)

RNA binding
hydrolase activity
manganese ion binding
m7G(5')pppN diphosphatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1800003097.rn.1	TC1800000412.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800003096.rn.1	TC1800000412.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800003098.rn.1	TC1800000412.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800003100.rn.1	TC1800000412.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800003078.rn.1	TC1800000412.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800003079.rn.1	TC1800000412.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800003095.rn.1	TC1800000412.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800003099.rn.1	TC1800000412.rn.1	RTA TC