Rn01528720_g1

• Gene Symbol: Casp1
• Gene Name: caspase 1
• Gene Aliases: Ice, Il1bc
• Chromosome Location: Chr.8: 2605743 - 2614637 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Casp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012762.2	NP_036894.2	8 - 9	1205		109
GenBank mRNA	D85899.1	-	8 - 9	1205		109

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800000012.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Protease, 3' Most, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Casp1

Panther Classification:

Molecular Function -

protease

Gene Ontology Categories:

Process(es)

response to hypoxia
microglial cell activation
proteolysis
apoptotic process
midgut development
myoblast fusion
memory
response to bacterium
response to toxic substance
regulation of autophagy
response to organic cyclic compound
protein processing
lung development
response to lipopolysaccharide
interleukin-1 beta production
response to ATP
response to drug
regulation of apoptotic process
positive regulation of apoptotic process
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of circadian sleep/wake cycle, non-REM sleep
positive regulation of cytokine secretion
positive regulation of interleukin-1 alpha secretion
positive regulation of interleukin-1 beta secretion
regulation of inflammatory response
mitochondrial depolarization
membrane hyperpolarization
pyroptosis
cellular response to mechanical stimulus
cellular response to organic substance
execution phase of apoptosis
programmed necrotic cell death
toxin transport

Function(s)

endopeptidase activity
cysteine-type endopeptidase activity
protein binding
peptidase activity
scaffold protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P468258	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	441419	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	611184	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	127291	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	916759	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	274734	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	375427	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	283533	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	950150	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	337425	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	959546	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	373604	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	279881	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	35087	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	41575	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	6204	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	109765	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	150998	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P468258	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P468258	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P468258	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P468258	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	37905	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	35430	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10907820	-	-
Affymetrix Rat Gene 1.0 ST Array	10907822	-	-
Affymetrix Rat Gene 1.0 ST Array	10907824	-	-
Affymetrix Rat Gene 1.0 ST Array	10907823	-	-
Affymetrix Rat Gene 1.0 ST Array	10907816	-	-
Affymetrix Rat Gene 1.0 ST Array	10907821	-	-
Affymetrix Rat Gene 1.0 ST Array	10907819	-	-
Affymetrix Rat Gene 1.0 ST Array	10907817	-	-
Affymetrix Rat Gene 1.0 ST Array	10907818	-	-
Affymetrix Rat Gene 1.1 ST Array	10907815	-	-
Rat Genome 230 2.0 Array	1369186_at	-	-
Rat Genome 230 2.0 Array	1369186_PM_at	-	-
Affymetrix HT Rat Focus Array	1369186_PM_at	-	-
Affymetrix HT Rat Focus Array	1369186_at	-	-
Affymetrix Rat Clariom S Assay	PSR0800000060.rn.1	TC0800000012.rn.1	RTA TC
Rat Expression Set 230	1369186_PM_at	-	-
Rat Expression Set 230	1369186_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10907815	-	-
Rat Genome U34 Set	U14647_at	-	-
Rat Genome U34 Set	S79676_s_at	-	-
Rat Genome U34 Set	U14647_g_at	-	-
Rat Genome U34 Set	S79676_s_at	-	-
Rat Genome U34 Set	U14647_at	-	-
Rat Genome U34 Set	U14647_g_at	-	-
Rat Genome U34 Set	U14647_at	-	-
Rat Genome U34 Set	U14647_g_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22397264	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1361826	-	-
RatRef-12 Expression BeadChip	ILMN_61763	-	-