Rn01529185_m1 Best Coverage

• Gene Symbol: Cdk6
• Gene Name: cyclin-dependent kinase 6
• Gene Aliases: -
• Chromosome Location: Chr.4: 27781728 - 27969252 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cdk6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001191861.1	NP_001178790.1	5 - 6	696		128
	XM_006236019.2	XP_006236081.1	6 - 7	1160		128
	XM_006236020.2	XP_006236082.1	6 - 7	1094		128
	XM_006236021.1	XP_006236083.1	6 - 7	1036		128
	XM_008762679.1	XP_008760901.1	6 - 7	1011		128

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400002370.rn.1

• Set Membership: Amplicon length greater than or equal to 101, Protein Kinase, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Process(es)

positive regulation of cell-matrix adhesion
hematopoietic progenitor cell differentiation
type B pancreatic cell development
protein phosphorylation
Notch signaling pathway
response to virus
regulation of gene expression
positive regulation of gene expression
phosphorylation
hemopoiesis
T cell differentiation in thymus
gliogenesis
cell dedifferentiation
negative regulation of myeloid cell differentiation
regulation of erythrocyte differentiation
negative regulation of osteoblast differentiation
negative regulation of cell cycle
positive regulation of fibroblast proliferation
negative regulation of epithelial cell proliferation
hematopoietic stem cell differentiation
negative regulation of cellular senescence

Function(s)

cyclin-dependent protein serine/threonine kinase activity
ATP binding
kinase activity
cyclin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P113443	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P113443	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P113443	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P113443	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P405071	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	8872	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	45438	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	8546	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	79418	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	37112	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10860772	-	-
Affymetrix Rat Gene 1.0 ST Array	10860771	-	-
Affymetrix Rat Gene 1.0 ST Array	10860770	-	-
Affymetrix Rat Gene 1.1 ST Array	10860765	-	-
Rat Genome 230 2.0 Array	1378622_at	-	-
Rat Genome 230 2.0 Array	1378622_PM_at	-	-
Rat Genome 230 2.0 Array	1375757_PM_at	-	-
Rat Genome 230 2.0 Array	1375757_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400016949.rn.1	TC0400002370.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400016950.rn.1	TC0400002370.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400016952.rn.1	TC0400002370.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400016948.rn.1	TC0400002370.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400016953.rn.1	TC0400002370.rn.1	RTA TC
Rat Expression Set 230	1375757_PM_at	-	-
Rat Expression Set 230	1375757_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10860765	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20942573	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1374074	-	-
RatRef-12 Expression BeadChip	ILMN_58924	-	-