Rn01532262_m1

• Gene Symbol: Atf1
• Gene Name: activating transcription factor 1
• Gene Aliases: Atf-1
• Chromosome Location: Chr.7: 141882261 - 141924790 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001100895.1	NP_001094365.1	1 - 2	261		158
GenBank mRNA	BC091222.1	-	1 - 2	235		158
	BC105853.1	-	1 - 2	258		158
	BC168224.1	-	1 - 2	262		158
	CO565801.1	-		261		158

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001763.rn.1

Additional Information:

This assay is in the 5'UTR region of the NM_001100895.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
positive regulation of neuron projection development
response to organic cyclic compound
response to cobalt ion
cellular protein complex assembly
positive regulation of DNA replication
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein complex binding
sequence-specific DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0700013550.rn.1	TC0700001763.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700013546.rn.1	TC0700001763.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700013544.rn.1	TC0700001763.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700013540.rn.1	TC0700001763.rn.1	RTA TC