Rn01532266_m1

• Gene Symbol: Atf1
• Gene Name: activating transcription factor 1
• Gene Aliases: Atf-1
• Chromosome Location: Chr.7: 141882261 - 141924790 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001100895.1	NP_001094365.1	6 - 7	932		128
GenBank mRNA	BC091222.1	-	6 - 7	906		128
	BC105853.1	-	6 - 7	929		128
	BC168224.1	-	7 - 8	984		128

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001763.rn.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

transcription by RNA polymerase II
positive regulation of neuron projection development
response to organic cyclic compound
response to cobalt ion
cellular protein-containing complex assembly
positive regulation of DNA replication
positive regulation of transcription by RNA polymerase II

Function(s)

RNA polymerase II transcription regulatory region sequence-specific DNA binding
DNA-binding transcription factor activity, RNA polymerase II-specific
DNA-binding transcription activator activity, RNA polymerase II-specific
DNA binding
sequence-specific DNA binding
protein-containing complex binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P166513	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P633046	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	755236	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	171860	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	82869	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	926673	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	837085	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	797321	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	716480	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	339902	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	166551	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	473490	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	618665	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	650949	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	685484	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	129584	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	269091	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	133777	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	773061	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	552628	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	515981	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	331974	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	691677	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	130255	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	205497	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	766594	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	770736	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	17053	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	128333	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	15144	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	389655	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	121972	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	75111	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	18865	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	35787	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P166513	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P633046	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P633046	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P166513	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P166513	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P633046	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P166513	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P718305	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	83956	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10899254	-	-
Affymetrix Rat Gene 1.0 ST Array	10899253	-	-
Affymetrix Rat Gene 1.0 ST Array	10899252	-	-
Affymetrix Rat Gene 1.0 ST Array	10899251	-	-
Affymetrix Rat Gene 1.0 ST Array	10899249	-	-
Affymetrix Rat Gene 1.0 ST Array	10899256	-	-
Affymetrix Rat Gene 1.0 ST Array	10899250	-	-
Affymetrix Rat Gene 1.0 ST Array	10899255	-	-
Affymetrix Rat Gene 1.1 ST Array	10899248	-	-
Rat Genome 230 2.0 Array	1389623_PM_at	-	-
Rat Genome 230 2.0 Array	1389623_at	-	-
Affymetrix HT Rat Focus Array	1389623_at	-	-
Affymetrix HT Rat Focus Array	1389623_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700013561.rn.1	TC0700001763.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700013559.rn.1	TC0700001763.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700013560.rn.1	TC0700001763.rn.1	RTA TC
Rat Expression Set 230	1389623_PM_at	-	-
Rat Expression Set 230	1389623_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10899248	-	-
Rat Genome U34 Set	rc_AA849092_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21919370	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1356841	-	-