Rn01532865_m1 Best Coverage

• Gene Symbol: Cers5
• Gene Name: ceramide synthase 5
• Gene Aliases: Lass5
• Chromosome Location: Chr.7: 141386388 - 141424374 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cers5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108993.1	NP_001102463.1	1 - 2	328		59
	XM_006257374.2	XP_006257436.1	1 - 2	311		59
	XM_006257375.2	XP_006257437.1	1 - 2	359		59
GenBank mRNA	BC166794.1	-	1 - 2	210	7937721	59

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700003891.rn.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

sphingolipid biosynthetic process
ceramide biosynthetic process

Function(s)

DNA binding
sphingosine N-acyltransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P17622	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	613632	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	102792	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	930931	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	365585	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	599753	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	64641	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	140115	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	506808	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	508009	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	384462	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	375720	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	423645	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	402591	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	576217	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	26675	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	635032	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	548255	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	684923	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	357264	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	247078	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	680153	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	631398	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	387210	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	659687	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	539880	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	172060	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	152427	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	143989	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	75811	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	116187	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	167078	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P17622	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P17622	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P17622	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P17622	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	58002	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	78401	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	75321	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10907205	-	-
Affymetrix Rat Gene 1.0 ST Array	10907200	-	-
Affymetrix Rat Gene 1.0 ST Array	10907204	-	-
Affymetrix Rat Gene 1.0 ST Array	10907206	-	-
Affymetrix Rat Gene 1.0 ST Array	10907201	-	-
Affymetrix Rat Gene 1.0 ST Array	10907210	-	-
Affymetrix Rat Gene 1.0 ST Array	10907199	-	-
Affymetrix Rat Gene 1.0 ST Array	10907203	-	-
Affymetrix Rat Gene 1.0 ST Array	10907209	-	-
Affymetrix Rat Gene 1.0 ST Array	10907208	-	-
Affymetrix Rat Gene 1.0 ST Array	10907202	-	-
Affymetrix Rat Gene 1.0 ST Array	10907207	-	-
Affymetrix Rat Gene 1.1 ST Array	10907198	-	-
Rat Genome 230 2.0 Array	1371676_PM_at	-	-
Rat Genome 230 2.0 Array	1371676_at	-	-
Affymetrix HT Rat Focus Array	1371676_at	-	-
Affymetrix HT Rat Focus Array	1371676_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700031413.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031411.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031392.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031403.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031408.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031409.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031407.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031395.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031415.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031399.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031400.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031401.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031396.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031394.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031414.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031405.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031402.rn.1	TC0700003891.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700031398.rn.1	TC0700003891.rn.1	RTA TC
Rat Expression Set 230	1371676_at	-	-
Rat Expression Set 230	1371676_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10907198	-	-
Rat Genome U34 Set	rc_AI228980_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1358479	-	-