Rn01533365_m1

• Gene Symbol: Vdr
• Gene Name: vitamin D (1,25- dihydroxyvitamin D3) receptor
• Gene Aliases: Nr1i1
• Chromosome Location: Chr.7: 139344452 - 139394138 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vdr
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017058.1	NP_058754.1	6 - 7	662		87
GenBank mRNA	J04147.1	-	6 - 7	662		87

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700003827.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vdr

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
cell morphogenesis
skeletal system development
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription by RNA polymerase II
transcription by RNA polymerase II
calcium ion transport
cellular calcium ion homeostasis
multicellular organism development
heart development
aging
lactation
negative regulation of cell population proliferation
animal organ morphogenesis
positive regulation of gene expression
negative regulation of keratinocyte proliferation
positive regulation of vitamin D 24-hydroxylase activity
intracellular receptor signaling pathway
response to estradiol
bile acid signaling pathway
steroid hormone mediated signaling pathway
positive regulation of keratinocyte differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
decidualization
intestinal absorption
response to calcium ion
regulation of calcium ion transport
positive regulation of apoptotic process involved in mammary gland involution
regulation of calcidiol 1-monooxygenase activity
mammary gland branching involved in pregnancy
vitamin D receptor signaling pathway
cellular response to vitamin D
apoptotic signaling pathway

Function(s)

DNA binding
DNA-binding transcription factor activity
steroid hormone receptor activity
nuclear receptor activity
vitamin D binding
protein binding
zinc ion binding
lithocholic acid receptor activity
sequence-specific DNA binding
retinoid X receptor binding
vitamin D response element binding
calcitriol binding
lithocholic acid binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0700030579.rn.1	TC0700003827.rn.1	RTA TC