Otud7b
Genomic Map
Back To TopAssay Details
| Gene Symbol: Otud7b | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001107697.1 | NP_001101167.1 | 11 - 12 | 1674 | 114 | |
| XM_006232957.2 | XP_006233019.1 | 11 - 12 | 1443 | 114 | ||
| XM_006232958.2 | XP_006233020.1 | 10 - 11 | 1251 | 114 | ||
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Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0200001744.rn.1Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Recommended Assay
Rattus norvegicus
1700
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription by RNA polymerase II
mucosal immune response
proteolysis
protein deubiquitination
negative regulation of interleukin-8 production
protein K11-linked deubiquitination
negative regulation of I-kappaB kinase/NF-kappaB signaling
protein K63-linked deubiquitination
protein K48-linked deubiquitination
negative regulation of protein localization to nucleus
DNA binding
thiol-dependent deubiquitinase
cysteine-type peptidase activity
zinc ion binding
K63-linked polyubiquitin modification-dependent protein binding
Lys48-specific deubiquitinase activity
negative regulation of transcription by RNA polymerase II
mucosal immune response
proteolysis
protein deubiquitination
negative regulation of interleukin-8 production
protein K11-linked deubiquitination
negative regulation of I-kappaB kinase/NF-kappaB signaling
protein K63-linked deubiquitination
protein K48-linked deubiquitination
negative regulation of protein localization to nucleus
DNA binding
thiol-dependent deubiquitinase
cysteine-type peptidase activity
zinc ion binding
K63-linked polyubiquitin modification-dependent protein binding
Lys48-specific deubiquitinase activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P914961 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P064746 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 640043 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 815535 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 206403 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 696331 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 53294 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 104358 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 478283 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 896366 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 342914 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 107094 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 431077 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583466 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 966765 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 483756 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 959486 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 169364 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 423700 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 226632 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 729497 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 492291 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 535518 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 258200 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 459051 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 529229 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 30574 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 371456 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 330669 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 19578 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 575182 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 785853 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 214154 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 399805 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 899724 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 222689 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 703577 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 631602 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 509077 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 663711 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 646995 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 608991 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 696930 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 119004 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 33080 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 97469 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 108952 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 168704 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 46703 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P064746 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P914961 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P914961 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P064746 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P914961 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P064746 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P461763 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 90197 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 73396 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10817480 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817471 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817473 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817476 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817477 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817481 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817475 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817478 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817472 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817482 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817479 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817468 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817474 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10817467 | - | - |
| Rat Genome 230 2.0 Array | 1380994_at | - | - |
| Rat Genome 230 2.0 Array | 1378973_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1380994_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1383311_at | - | - |
| Rat Genome 230 2.0 Array | 1374348_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1383311_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1378973_at | - | - |
| Rat Genome 230 2.0 Array | 1374348_at | - | - |
| Affymetrix HT Rat Focus Array | 1374348_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1380994_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1380994_at | - | - |
| Affymetrix HT Rat Focus Array | 1378973_at | - | - |
| Affymetrix HT Rat Focus Array | 1378973_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1374348_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0200011775.rn.1 | TC0200001744.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200011771.rn.1 | TC0200001744.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200011777.rn.1 | TC0200001744.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200011772.rn.1 | TC0200001744.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200011770.rn.1 | TC0200001744.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200011773.rn.1 | TC0200001744.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200011776.rn.1 | TC0200001744.rn.1 | RTA TC |
| Rat Expression Set 230 | 1374348_PM_at | - | - |
| Rat Expression Set 230 | 1374348_at | - | - |
| Rat Expression Set 230 | 1383311_at | - | - |
| Rat Expression Set 230 | 1380994_PM_at | - | - |
| Rat Expression Set 230 | 1378973_at | - | - |
| Rat Expression Set 230 | 1380994_at | - | - |
| Rat Expression Set 230 | 1383311_PM_at | - | - |
| Rat Expression Set 230 | 1378973_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10817467 | - | - |
| Rat Genome U34 Set | rc_AI030586_at | - | - |
| Rat Genome U34 Set | rc_AI072969_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21467314 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1373232 | - | - |
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