Rn01533608_m1 Best Coverage

• Gene Symbol: Psmd4
• Gene Name: proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
• Gene Aliases: -
• Chromosome Location: Chr.2: 196198303 - 196207568 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Psmd4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031331.1	NP_112621.1	2 - 3	239		84
	XM_006232924.2	XP_006232986.1	2 - 3	244		84
GenBank mRNA	AB017188.1	-	2 - 3	239		84
	AF175575.1	-	2 - 3	180		84
	BC060559.1	-	2 - 3	189	6891370	84
	FQ209672.1	-	1 - 2	41		84

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200004195.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Psmd4

Panther Classification:

Molecular Function -

protease

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
fluid transport

Function(s)

transcription factor binding
identical protein binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P212708	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	170839	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	350232	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	193789	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	688761	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	659097	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	75209	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	160542	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	122029	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P212708	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P212708	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P212708	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P212708	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700546972	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	45038	-	-
Agilent Rat cDNA Microarray (G4105A)	700546972	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10824922	-	-
Affymetrix Rat Gene 1.0 ST Array	10824920	-	-
Affymetrix Rat Gene 1.0 ST Array	10824915	-	-
Affymetrix Rat Gene 1.0 ST Array	10824921	-	-
Affymetrix Rat Gene 1.0 ST Array	10824923	-	-
Affymetrix Rat Gene 1.0 ST Array	10824925	-	-
Affymetrix Rat Gene 1.0 ST Array	10824924	-	-
Affymetrix Rat Gene 1.0 ST Array	10824916	-	-
Affymetrix Rat Gene 1.0 ST Array	10824918	-	-
Affymetrix Rat Gene 1.0 ST Array	10824919	-	-
Affymetrix Rat Gene 1.1 ST Array	10824914	-	-
Rat Genome 230 2.0 Array	1386930_PM_at	-	-
Rat Genome 230 2.0 Array	1386930_at	-	-
Affymetrix HT Rat Focus Array	1386930_PM_at	-	-
Affymetrix HT Rat Focus Array	1386930_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200028636.rn.1	TC0200004195.rn.1	RTA TC
Rat Expression Set 230	1386930_PM_at	-	-
Rat Expression Set 230	1386930_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10824914	-	-
Rat Genome U34 Set	rc_AA799887_s_at	-	-
Rat Genome U34 Set	AB017188_at	-	-
Rat Genome U34 Set	AB017188_g_at	-	-
Rat Genome U34 Set	rc_AI236731_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21421206	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1353983	-	-
RatRef-12 Expression BeadChip	ILMN_49488	-	-