Rn01533726_g1

• Gene Symbol: Scnm1
• Gene Name: sodium channel modifier 1
• Gene Aliases: -
• Chromosome Location: Chr.2: 196300239 - 196304343 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Scnm1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107696.1	NP_001101166.1	6 - 7	700		67
	XM_006232882.2	XP_006232944.1	5 - 6	539		67
	XM_006232883.2	XP_006232945.1	6 - 7	618		67
GenBank mRNA	FQ232097.1	-		658		67

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200004199.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Process(es)

RNA splicing

Function(s)

enzyme binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P696578	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	650793	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	790532	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	7378	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P696578	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P696578	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P696578	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P696578	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10824949	-	-
Affymetrix Rat Gene 1.0 ST Array	10824947	-	-
Affymetrix Rat Gene 1.0 ST Array	10824944	-	-
Affymetrix Rat Gene 1.0 ST Array	10824946	-	-
Affymetrix Rat Gene 1.0 ST Array	10824945	-	-
Affymetrix Rat Gene 1.0 ST Array	10824950	-	-
Affymetrix Rat Gene 1.0 ST Array	10824948	-	-
Affymetrix Rat Gene 1.1 ST Array	10824943	-	-
Rat Genome 230 2.0 Array	1373377_at	-	-
Rat Genome 230 2.0 Array	1373377_PM_at	-	-
Affymetrix HT Rat Focus Array	1373377_at	-	-
Affymetrix HT Rat Focus Array	1373377_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200028680.rn.1	TC0200004199.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200028681.rn.1	TC0200004199.rn.1	RTA TC
Rat Expression Set 230	1373377_PM_at	-	-
Rat Expression Set 230	1373377_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10824943	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21877932	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1361983	-	-