Rn01535544_m1 Best Coverage

• Gene Symbol: Stk11
• Gene Name: serine/threonine kinase 11
• Gene Aliases: Lkb1
• Chromosome Location: Chr.7: 12440751 - 12457513 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Stk11
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108069.1	NP_001101539.1	7 - 8	1743		59
	XM_006240910.1	XP_006240972.1	7 - 8	1738		59
	XM_008765096.1	XP_008763318.1	7 - 8	1738		59

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700002177.rn.1

• Set Membership: Amplicon length less than or equal to 70, Protein Kinase, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

regulation of cell growth
tissue homeostasis
vasculature development
protein phosphorylation
autophagy
cellular response to DNA damage stimulus
cell cycle arrest
spermatid development
axonogenesis
negative regulation of cell proliferation
response to ionizing radiation
establishment of cell polarity
regulation of Wnt signaling pathway
negative regulation of cell growth
positive regulation of transforming growth factor beta receptor signaling pathway
activation of protein kinase activity
response to glucagon
response to lipid
TCR signalosome assembly
glucose homeostasis
anoikis
response to peptide hormone
positive thymic T cell selection
positive regulation of gluconeogenesis
positive regulation of protein kinase activity
protein autophosphorylation
regulation of dendrite morphogenesis
positive regulation of peptidyl-tyrosine phosphorylation
positive regulation of axonogenesis
T cell receptor signaling pathway
protein heterooligomerization
Golgi localization
regulation of protein kinase B signaling
canonical Wnt signaling pathway
negative regulation of epithelial cell proliferation involved in prostate gland development
cellular response to UV-B
intrinsic apoptotic signaling pathway by p53 class mediator
dendrite extension
positive regulation of protein localization to nucleus

Function(s)

magnesium ion binding
p53 binding
protein serine/threonine kinase activity
ATP binding
LRR domain binding
protein kinase activator activity
protein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P410670	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	522347	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	464246	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	330399	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	332722	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	114493	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	535973	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	412234	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	505288	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	777069	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	460989	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	148964	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	409836	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	583930	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	104678	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	80225	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	829	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P410670	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P410670	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P410670	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P410670	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P410676	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	31672	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10900615	-	-
Affymetrix Rat Gene 1.0 ST Array	10900613	-	-
Affymetrix Rat Gene 1.0 ST Array	10900611	-	-
Affymetrix Rat Gene 1.0 ST Array	10900609	-	-
Affymetrix Rat Gene 1.0 ST Array	10900610	-	-
Affymetrix Rat Gene 1.0 ST Array	10900607	-	-
Affymetrix Rat Gene 1.0 ST Array	10900614	-	-
Affymetrix Rat Gene 1.0 ST Array	10900612	-	-
Affymetrix Rat Gene 1.0 ST Array	10900617	-	-
Affymetrix Rat Gene 1.0 ST Array	10900616	-	-
Affymetrix Rat Gene 1.1 ST Array	10900606	-	-
Rat Genome 230 2.0 Array	1381830_PM_x_at	-	-
Rat Genome 230 2.0 Array	1375364_PM_at	-	-
Rat Genome 230 2.0 Array	1375364_at	-	-
Rat Genome 230 2.0 Array	1375238_PM_at	-	-
Rat Genome 230 2.0 Array	1375238_at	-	-
Rat Genome 230 2.0 Array	1381830_x_at	-	-
Affymetrix HT Rat Focus Array	1375364_PM_at	-	-
Affymetrix HT Rat Focus Array	1381830_PM_x_at	-	-
Affymetrix HT Rat Focus Array	1375238_at	-	-
Affymetrix HT Rat Focus Array	1375364_at	-	-
Affymetrix HT Rat Focus Array	1375238_PM_at	-	-
Affymetrix HT Rat Focus Array	1381830_x_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700017310.rn.1	TC0700002177.rn.1	RTA TC
Rat Expression Set 230	1375364_PM_at	-	-
Rat Expression Set 230	1375238_PM_at	-	-
Rat Expression Set 230	1375364_at	-	-
Rat Expression Set 230	1375238_at	-	-
Rat Expression Set 230	1381830_x_at	-	-
Rat Expression Set 230	1381830_PM_x_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10900606	-	-
Rat Genome U34 Set	rc_AI045508_at	-	-
Rat Genome U34 Set	rc_AI113337_at	-	-
Rat Genome U34 Set	rc_AI136725_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21645566	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1366315	-	-