Rn01535818_m1

Gene Symbol:

Rbm39 LOC100910882

Gene Name:

RNA binding motif protein 39

RNA-binding protein 39-like

Gene Aliases:

Rnp1, Rnpc2, Rrm

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Chromosome Location:

Chr.3: 151691505 - 151724715 on Build Rnor_6.0

Chromosome Location:

Chr.3: 152226018 - 152259228 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

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Assay Details

Gene Symbol: Rbm39
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001013207.2	NP_001013225.1		1551		159
	XM_006235331.2	XP_006235393.1		1627		159
	XM_006235332.2	XP_006235394.1		1648		159
	XM_006235335.2	XP_006235397.1		3069		159
	XM_008762349.1	XP_008760571.1		1564		159
	XM_008762350.1	XP_008760572.1		1585		159
	XM_008762351.1	XP_008760573.1	13 - 14	7467		159
	XM_008762352.1	XP_008760574.1	13 - 14	4559		159
	XM_008762353.1	XP_008760575.1		6201		159
	XM_008762354.1	XP_008760576.1	13 - 14	7488		159
	XM_008762355.1	XP_008760577.1		5977		159
	XM_008762356.1	XP_008760578.1		1546		159
GenBank mRNA	AY769432.1	-		421		159
	BC078917.1	-		1642		159
	BC091394.1	-		1540		159

Gene Symbol: LOC100910882
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_003749605.3	XP_003749653.1	14 - 15	1627		159
	XM_003749606.3	XP_003749654.1	14 - 15	1609		159
	XM_006235443.2	XP_006235505.1	14 - 15	1648		159
	XM_006235446.2	XP_006235508.1	14 - 15	3069		159
	XM_008762415.1	XP_008760637.1	13 - 14	1564		159
	XM_008762416.1	XP_008760638.1	13 - 14	1585		159
	XM_008762417.1	XP_008760639.1	13 - 14	7467		159
	XM_008762418.1	XP_008760640.1	13 - 14	4559		159
	XM_008762419.1	XP_008760641.1	13 - 14	6201		159
	XM_008762420.1	XP_008760642.1	13 - 14	7488		159
	XM_008762421.1	XP_008760643.1	14 - 15	5977		159
	XM_008762422.1	XP_008760644.1	13 - 14	1546		159

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300004569.rn.1, TC0300004575.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rbm39
Click here to find siRNAs for Gene LOC100910882

Gene Ontology Categories:

Process(es)

mRNA processing

Function(s)

nucleotide binding
RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0300035288.rn.1	TC0300004575.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300035149.rn.1	TC0300004569.rn.1	RTA TC