Rn01537833_m1 Best Coverage

• Gene Symbol: Rarb
• Gene Name: retinoic acid receptor, beta
• Gene Aliases: -
• Chromosome Location: Chr.15: 10120206 - 10262599 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rarb
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031529.1	NP_113717.1	1 - 2	693		81
GenBank mRNA	AJ002942.1	-	1 - 2	351		81

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1500000103.rn.1

• Set Membership: Amplicon length between 71 and 85, Nuclear Receptor, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
ureteric bud development
glandular epithelial cell development
outflow tract septum morphogenesis
retinal pigment epithelium development
growth plate cartilage development
transcription, DNA-templated
regulation of transcription, DNA-templated
positive regulation of cell proliferation
negative regulation of cell proliferation
striatum development
neurogenesis
regulation of myelination
negative regulation of chondrocyte differentiation
embryonic hindlimb morphogenesis
multicellular organism growth
positive regulation of apoptotic process
negative regulation of apoptotic process
positive regulation of programmed cell death
steroid hormone mediated signaling pathway
positive regulation of neuron differentiation
positive regulation of transcription from RNA polymerase II promoter
embryonic eye morphogenesis
retinoic acid receptor signaling pathway
embryonic digestive tract development
ventricular cardiac muscle cell differentiation
retina development in camera-type eye
bone development
negative regulation of cartilage development

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
retinoic acid receptor activity
protein binding
drug binding
zinc ion binding
protein complex binding
sequence-specific DNA binding
retinoid X receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P016245	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P016245	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P016249	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P016245	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P016249	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P016249	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P016245	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1500000906.rn.1	TC1500000103.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1500000907.rn.1	TC1500000103.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1500000908.rn.1	TC1500000103.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1500000910.rn.1	TC1500000103.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10782467	-	-