Rn01645281_m1 Best Coverage

• Gene Symbol: Runx1
• Gene Name: runt-related transcription factor 1
• Gene Aliases: Aml1, Cbfa2
• Chromosome Location: Chr.11: 32765147 - 32860628 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Runx1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017325.1	NP_059021.1	2 - 3	829		74
	XM_008768598.1	XP_008766820.1	2 - 3	2631		74
	XM_008768599.1	XP_008766821.1	2 - 3	2631		74
GenBank mRNA	L35271.1	-	2 - 3	829		74

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1100001335.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Runx1

Panther Classification:

Molecular Function -

Runt transcription factor

Gene Ontology Categories:

Process(es)

skeletal system development
in utero embryonic development
liver development
myeloid progenitor cell differentiation
transcription, DNA-templated
regulation of transcription, DNA-templated
central nervous system development
negative regulation of cell proliferation
regulation of signal transduction
hemopoiesis
myeloid cell differentiation
neuron differentiation
negative regulation of granulocyte differentiation
positive regulation of granulocyte differentiation
hair follicle morphogenesis
response to retinoic acid
positive regulation of interleukin-2 production
embryonic hemopoiesis
positive regulation of angiogenesis
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
behavioral response to pain
neuron development
definitive hemopoiesis
regulation of hair follicle cell proliferation
cellular response to transforming growth factor beta stimulus
positive regulation of cell maturation
positive regulation of progesterone secretion

Function(s)

regulatory region DNA binding
RNA polymerase II regulatory region sequence-specific DNA binding
core promoter binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
molecular_function
DNA binding
transcription factor activity, sequence-specific DNA binding
calcium ion binding
ATP binding
transcription factor binding
protein homodimerization activity
protein heterodimerization activity
repressing transcription factor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1100007949.rn.1	TC1100001335.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100007951.rn.1	TC1100001335.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100007950.rn.1	TC1100001335.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100007948.rn.1	TC1100001335.rn.1	RTA TC