Rn01647147_g1 Best Coverage

• Gene Symbol: Cyp27b1
• Gene Name: cytochrome P450, family 27, subfamily b, polypeptide 1
• Gene Aliases: Cyp40
• Chromosome Location: Chr.7: 70333150 - 70340006 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cyp27b1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053763.1	NP_446215.1	8 - 9	1413		61
	XM_008765374.1	XP_008763596.1	9 - 10	3285		61
GenBank mRNA	AB001992.1	-	8 - 9	1413		61
	AF000139.1	-	8 - 9	1405		61

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700000885.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cyp27b1

Panther Classification:

Molecular Function -

oxygenase

Gene Ontology Categories:

Process(es)

calcium ion transport
aging
lactation
negative regulation of cell proliferation
negative regulation of calcidiol 1-monooxygenase activity
positive regulation of vitamin D 24-hydroxylase activity
bone mineralization
negative regulation of cell growth
regulation of bone mineralization
response to lipopolysaccharide
response to insulin
response to vitamin D
response to interferon-gamma
response to prostaglandin E
calcitriol biosynthetic process from calciol
vitamin D metabolic process
vitamin D catabolic process
response to drug
response to peptide hormone
response to estrogen
positive regulation of keratinocyte differentiation
response to copper ion
decidualization
response to cAMP
response to calcium ion
calcium ion homeostasis
oxidation-reduction process
G1 to G0 transition
positive regulation of vitamin D receptor signaling pathway

Function(s)

monooxygenase activity
calcidiol 1-monooxygenase activity
iron ion binding
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
heme binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P12926	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12926	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12926	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P12926	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P12926	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10940551	-	-
Affymetrix Rat Gene 1.1 ST Array	10940551	-	-
Rat Genome 230 2.0 Array	1368636_PM_at	-	-
Rat Genome 230 2.0 Array	1368636_at	-	-
Affymetrix HT Rat Focus Array	1368636_at	-	-
Affymetrix HT Rat Focus Array	1368636_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700006589.rn.1	TC0700000885.rn.1	RTA TC
Rat Expression Set 230	1368636_at	-	-
Rat Expression Set 230	1368636_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10940551	-	-
Rat Genome U34 Set	AF000139_s_at	-	-
Rat Genome U34 Set	AF000139_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21344632	-	-