Rn01749115_m1 Best Coverage

• Gene Symbol: Cd27
• Gene Name: CD27 molecule
• Gene Aliases: Tnfrsf7
• Chromosome Location: Chr.4: 157744881 - 157751598 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cd27
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001024335.1	NP_001019506.1	2 - 3	332		94
	XM_006237380.2	XP_006237442.1	2 - 3	1842		94
	XM_006237381.2	XP_006237443.1	2 - 3	1842		94
	XM_006237382.2	XP_006237444.1	2 - 3	1842		94
	XM_008763293.1	XP_008761515.1	3 - 4	1637		94
GenBank mRNA	BC095844.1	-	2 - 3	332		94

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400003759.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cd27

Gene Ontology Categories:

Process(es)

negative regulation of apoptotic process
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
response to ethanol
positive regulation of JNK cascade
negative regulation of T cell apoptotic process
extrinsic apoptotic signaling pathway

Function(s)

molecular_function
cysteine-type endopeptidase inhibitor activity involved in apoptotic process

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P102935	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	844376	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	78028	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	240860	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	12743	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P102935	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P102935	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P102935	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	37204	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10865677	-	-
Affymetrix Rat Gene 1.0 ST Array	10865678	-	-
Affymetrix Rat Gene 1.0 ST Array	10865673	-	-
Affymetrix Rat Gene 1.0 ST Array	10865676	-	-
Affymetrix Rat Gene 1.0 ST Array	10865675	-	-
Affymetrix Rat Gene 1.0 ST Array	10865674	-	-
Affymetrix Rat Gene 1.1 ST Array	10865672	-	-
Affymetrix Rat Clariom S Assay	PSR0400026763.rn.1	TC0400003759.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10865672	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22371124	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1649775	-	-