Rn01749720_m1

• Gene Symbol: Ctnnbip1
• Gene Name: catenin, beta-interacting protein 1
• Gene Aliases: -
• Chromosome Location: Chr.5: 166464180 - 166513027 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ctnnbip1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001173388.1	NP_001166859.1	4 - 5	416		106
	XM_006239436.2	XP_006239498.1	3 - 4	403		106
GenBank mRNA	BC098773.1	-	3 - 4	266		106
	CB611569.1	-	4 - 5	433		106

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001933.rn.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
branching involved in ureteric bud morphogenesis
regulation of vascular permeability involved in acute inflammatory response
biological_process
anterior/posterior pattern specification
Wnt signaling pathway
negative regulation of Wnt signaling pathway
negative regulation of protein complex assembly
negative regulation of protein binding
negative regulation of DNA binding
negative regulation of sequence-specific DNA binding transcription factor activity
positive regulation of monocyte differentiation
positive regulation of osteoblast differentiation
negative regulation of smooth muscle cell proliferation
negative regulation of transcription initiation from RNA polymerase II promoter
negative regulation of mesenchymal cell proliferation

Function(s)

molecular_function
beta-catenin binding
armadillo repeat domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P512295	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P512295	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P512295	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P512295	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P181518	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P502839	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P512295	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	93855	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10874093	-	-
Affymetrix Rat Gene 1.0 ST Array	10874094	-	-
Affymetrix Rat Gene 1.0 ST Array	10874092	-	-
Affymetrix Rat Gene 1.0 ST Array	10874088	-	-
Affymetrix Rat Gene 1.0 ST Array	10874091	-	-
Affymetrix Rat Gene 1.1 ST Array	10874086	-	-
Rat Genome 230 2.0 Array	1377733_at	-	-
Rat Genome 230 2.0 Array	1375854_at	-	-
Rat Genome 230 2.0 Array	1373279_at	-	-
Rat Genome 230 2.0 Array	1377733_PM_at	-	-
Rat Genome 230 2.0 Array	1375854_PM_at	-	-
Rat Genome 230 2.0 Array	1373279_PM_at	-	-
Affymetrix HT Rat Focus Array	1373279_at	-	-
Affymetrix HT Rat Focus Array	1375854_at	-	-
Affymetrix HT Rat Focus Array	1373279_PM_at	-	-
Affymetrix HT Rat Focus Array	1375854_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500014548.rn.1	TC0500001933.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500014546.rn.1	TC0500001933.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500014547.rn.1	TC0500001933.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500014549.rn.1	TC0500001933.rn.1	RTA TC
Rat Expression Set 230	1375854_at	-	-
Rat Expression Set 230	1377733_at	-	-
Rat Expression Set 230	1373279_PM_at	-	-
Rat Expression Set 230	1375854_PM_at	-	-
Rat Expression Set 230	1373279_at	-	-
Rat Expression Set 230	1377733_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10874086	-	-
Rat Genome U34 Set	rc_AA944531_g_at	-	-
Rat Genome U34 Set	rc_AA925168_at	-	-
Rat Genome U34 Set	rc_AA944531_at	-	-
Rat Genome U34 Set	rc_AI175992_at	-	-
Rat Genome U34 Set	rc_AI103643_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1354721	-	-