Rn01751630_gH

• Gene Symbol: Shmt1
• Gene Name: serine hydroxymethyltransferase 1 (soluble)
• Gene Aliases: LRRGT00032, Shmt, mShmt
• Chromosome Location: Chr.10: 47030812 - 47059216 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Shmt1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001047842.1	NP_001041307.1	7 - 8	952		96
	XM_006246469.2	XP_006246531.1	4 - 5	735		96
GenBank mRNA	AY383687.1	-	7 - 8	952		96

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000002942.rn.1

• Set Membership: Amplicon length between 86 and 100, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

methyltransferase

Gene Ontology Categories:

Process(es)

glycine metabolic process
glycine biosynthetic process
L-serine metabolic process
L-serine catabolic process
purine nucleobase biosynthetic process
glycine biosynthetic process from serine
tetrahydrofolate interconversion
folic acid metabolic process
protein tetramerization
protein homotetramerization

Function(s)

glycine hydroxymethyltransferase activity
L-allo-threonine aldolase activity
amino acid binding
pyridoxal phosphate binding
identical protein binding
protein homodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1000025895.rn.1	TC1000002942.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000025884.rn.1	TC1000002942.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000025885.rn.1	TC1000002942.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000025893.rn.1	TC1000002942.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000025894.rn.1	TC1000002942.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000025896.rn.1	TC1000002942.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000025883.rn.1	TC1000002942.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000025882.rn.1	TC1000002942.rn.1	RTA TC