Rn01751910_g1 Best Coverage

• Gene Symbol: Traf4
• Gene Name: Tnf receptor associated factor 4
• Gene Aliases: -
• Chromosome Location: Chr.10: 65418698 - 65424802 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Traf4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107017.2	NP_001100487.1	3 - 4	381		58
GenBank mRNA	BC162047.1	-	3 - 4	381		58

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000003325.rn.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

activation of NF-kappaB-inducing kinase activity
respiratory gaseous exchange by respiratory system
protein ubiquitination
respiratory tube development
regulation of apoptotic process
positive regulation of protein kinase activity
positive regulation of JNK cascade
positive regulation of protein homodimerization activity

Function(s)

ubiquitin-protein transferase activity
tumor necrosis factor receptor binding
zinc ion binding
protein kinase binding
ubiquitin protein ligase binding
thioesterase binding
WW domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P567527	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	940515	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	938818	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	169300	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	73807	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	531795	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P567527	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P567527	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P567527	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P567527	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10736262	-	-
Affymetrix Rat Gene 1.0 ST Array	10736264	-	-
Affymetrix Rat Gene 1.0 ST Array	10736258	-	-
Affymetrix Rat Gene 1.0 ST Array	10736263	-	-
Affymetrix Rat Gene 1.0 ST Array	10736260	-	-
Affymetrix Rat Gene 1.0 ST Array	10736261	-	-
Affymetrix Rat Gene 1.0 ST Array	10736259	-	-
Affymetrix Rat Gene 1.1 ST Array	10736257	-	-
Rat Genome 230 2.0 Array	1376346_at	-	-
Rat Genome 230 2.0 Array	1371551_at	-	-
Rat Genome 230 2.0 Array	1376346_PM_at	-	-
Rat Genome 230 2.0 Array	1371551_PM_at	-	-
Affymetrix HT Rat Focus Array	1371551_PM_at	-	-
Affymetrix HT Rat Focus Array	1371551_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000029794.rn.1	TC1000003325.rn.1	RTA TC
Rat Expression Set 230	1371551_at	-	-
Rat Expression Set 230	1371551_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10736257	-	-
Rat Genome U34 Set	rc_AA850542_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1351608	-	-