Rn01752122_m1 Best Coverage

• Gene Symbol: C1qtnf1
• Gene Name: C1q and tumor necrosis factor related protein 1
• Gene Aliases: Ctrp1
• Chromosome Location: Chr.10: 107455845 - 107477160 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: C1qtnf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001007675.1	NP_001007676.1	3 - 4	564		66
	XM_006247800.2	XP_006247862.1	3 - 4	1090		66
	XM_006247801.2	XP_006247863.1	3 - 4	705		66
	XM_006247802.2	XP_006247864.1	3 - 4	1162		66
	XM_008768374.1	XP_008766596.1	3 - 4	766		66
GenBank mRNA	BC083720.1	-	3 - 4	564		66
	FQ209955.1	-	3 - 4	665		66

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000002031.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene C1qtnf1

Gene Ontology Categories:

Process(es)

positive regulation of cytosolic calcium ion concentration
negative regulation of platelet activation
positive regulation of gene expression
regulation of glucose metabolic process
positive regulation of MAPK cascade
protein homooligomerization
positive regulation of protein kinase B signaling
protein heterotrimerization
negative regulation of platelet aggregation
positive regulation of aldosterone secretion

Function(s)

collagen binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P520929	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	416859	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	939302	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	922339	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	684282	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	615600	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	272095	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	339943	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	729490	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	606999	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	286649	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	657452	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	471230	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	255786	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	282434	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	33640	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	263158	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	123540	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	115989	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P520929	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P520929	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P520929	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P520929	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	84662	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	59246	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10739931	-	-
Affymetrix Rat Gene 1.0 ST Array	10739932	-	-
Affymetrix Rat Gene 1.0 ST Array	10739930	-	-
Affymetrix Rat Gene 1.0 ST Array	10739928	-	-
Affymetrix Rat Gene 1.1 ST Array	10739927	-	-
Rat Genome 230 2.0 Array	1374722_at	-	-
Rat Genome 230 2.0 Array	1372590_PM_at	-	-
Rat Genome 230 2.0 Array	1372590_at	-	-
Rat Genome 230 2.0 Array	1374722_PM_at	-	-
Affymetrix HT Rat Focus Array	1374722_at	-	-
Affymetrix HT Rat Focus Array	1374722_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000018241.rn.1	TC1000002031.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000018242.rn.1	TC1000002031.rn.1	RTA TC
Rat Expression Set 230	1374722_at	-	-
Rat Expression Set 230	1374722_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10739927	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20715094	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365038	-	-
RatRef-12 Expression BeadChip	ILMN_52439	-	-