Rn01757314_g1

Gene Symbol:

LOC100911260 Hcfc1

Gene Name:

host cell factor 1-like

host cell factor C1

Gene Aliases:

-

RGD1563804

Chromosome Location:

Chr.X: 156759369 - 156771130 on Build Rnor_6.0

Chromosome Location:

Chr.X: 156812057 - 156837227 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: LOC100911260
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_006229638.1	XP_006229700.1	13 - 14	4016		58

Gene Symbol: Hcfc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001139507.1	NP_001132979.1	24 - 25	7153		58
	XM_006229593.2	XP_006229655.1	24 - 25	7267		58
	XM_006229594.2	XP_006229656.1	24 - 25	7263		58
	XM_006229596.2	XP_006229658.1	24 - 25	7132		58
	XM_006229597.1	XP_006229659.1	24 - 25	7148		58

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of gene expression
release from viral latency
regulation of protein complex assembly
histone H4-K5 acetylation
histone H4-K8 acetylation
histone H4-K16 acetylation
positive regulation of transcription from RNA polymerase II promoter
protein stabilization
cellular response to organic cyclic compound

Function(s)

transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
molecular_function
chromatin binding
transcription coactivator activity
identical protein binding
histone acetyltransferase activity (H4-K5 specific)
histone acetyltransferase activity (H4-K8 specific)
histone acetyltransferase activity (H4-K16 specific)

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P067310	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P067305	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	415191	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	68202	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	8970	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	132182	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	501008	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	725055	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	477077	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	270796	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	399822	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	713723	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	743995	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	807907	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	424833	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	972420	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	250204	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	565162	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	86050	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	629668	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	456680	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	504098	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	72300	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	93605	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	119800	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P067310	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P067305	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P067310	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P067305	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P067305	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P067310	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P552807	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10940274	-	-
Affymetrix Rat Gene 1.0 ST Array	10940279	-	-
Affymetrix Rat Gene 1.0 ST Array	10940288	-	-
Affymetrix Rat Gene 1.0 ST Array	10940287	-	-
Affymetrix Rat Gene 1.0 ST Array	10940285	-	-
Affymetrix Rat Gene 1.0 ST Array	10940291	-	-
Affymetrix Rat Gene 1.0 ST Array	10940272	-	-
Affymetrix Rat Gene 1.0 ST Array	10940281	-	-
Affymetrix Rat Gene 1.0 ST Array	10940289	-	-
Affymetrix Rat Gene 1.0 ST Array	10940286	-	-
Affymetrix Rat Gene 1.0 ST Array	10940294	-	-
Affymetrix Rat Gene 1.0 ST Array	10940275	-	-
Affymetrix Rat Gene 1.0 ST Array	10940283	-	-
Affymetrix Rat Gene 1.0 ST Array	10940276	-	-
Affymetrix Rat Gene 1.0 ST Array	10940293	-	-
Affymetrix Rat Gene 1.0 ST Array	10940292	-	-
Affymetrix Rat Gene 1.0 ST Array	10940284	-	-
Affymetrix Rat Gene 1.0 ST Array	10940273	-	-
Affymetrix Rat Gene 1.0 ST Array	10940277	-	-
Affymetrix Rat Gene 1.0 ST Array	10940280	-	-
Affymetrix Rat Gene 1.0 ST Array	10940295	-	-
Affymetrix Rat Gene 1.0 ST Array	10940282	-	-
Affymetrix Rat Gene 1.0 ST Array	10940290	-	-
Affymetrix Rat Gene 1.0 ST Array	10940278	-	-
Affymetrix Rat Gene 1.1 ST Array	10940271	-	-
Rat Genome 230 2.0 Array	1372530_at	-	-
Rat Genome 230 2.0 Array	1372530_PM_at	-	-
Affymetrix HT Rat Focus Array	1372530_PM_at	-	-
Affymetrix HT Rat Focus Array	1372530_at	-	-
Affymetrix Rat Clariom S Assay	PSR0X00007912.rn.1	TC0X00001304.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00007914.rn.1	TC0X00001304.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00007913.rn.1	TC0X00001304.rn.1	RTA TC
Rat Expression Set 230	1372530_PM_at	-	-
Rat Expression Set 230	1372530_at	-	-
Rat Genome U34 Set	rc_AA944190_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1350267	-	-