Rn01758208_m1 Best Coverage

• Gene Symbol: Aldh5a1
• Gene Name: aldehyde dehydrogenase 5 family, member A1
• Gene Aliases: Ssadh
• Chromosome Location: Chr.17: 42132085 - 42159413 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Aldh5a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022851.1	NP_074042.1	9 - 10	1386		58
GenBank mRNA	L34821.1	-	9 - 10	1265		58

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1700000614.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

glucose metabolic process
acetate metabolic process
succinate metabolic process
glutamate metabolic process
glutamine metabolic process
glycerophospholipid metabolic process
glucosylceramide metabolic process
galactosylceramide metabolic process
glutathione metabolic process
central nervous system development
gamma-aminobutyric acid metabolic process
gamma-aminobutyric acid catabolic process
post-embryonic development
respiratory electron transport chain
neurotransmitter catabolic process
short-chain fatty acid metabolic process
protein homotetramerization
oxidation-reduction process

Function(s)

aldehyde dehydrogenase (NAD) activity
succinate-semialdehyde dehydrogenase (NAD+) activity
succinate-semialdehyde dehydrogenase [NAD(P)+] activity
carboxylic acid binding
NAD binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P030919	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P067678	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P030919	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P067678	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P030919	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P067678	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P067678	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P030919	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P381822	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700637986	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	38499	-	-
Agilent Rat cDNA Microarray (G4105A)	700637986	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10795104	-	-
Affymetrix Rat Gene 1.0 ST Array	10795098	-	-
Affymetrix Rat Gene 1.0 ST Array	10795100	-	-
Affymetrix Rat Gene 1.0 ST Array	10795102	-	-
Affymetrix Rat Gene 1.0 ST Array	10795099	-	-
Affymetrix Rat Gene 1.0 ST Array	10795096	-	-
Affymetrix Rat Gene 1.0 ST Array	10795095	-	-
Affymetrix Rat Gene 1.0 ST Array	10795097	-	-
Affymetrix Rat Gene 1.0 ST Array	10795101	-	-
Affymetrix Rat Gene 1.0 ST Array	10795103	-	-
Affymetrix Rat Gene 1.1 ST Array	10795093	-	-
Rat Genome 230 2.0 Array	1391657_PM_at	-	-
Rat Genome 230 2.0 Array	1391657_at	-	-
Rat Genome 230 2.0 Array	1371062_PM_at	-	-
Rat Genome 230 2.0 Array	1371062_at	-	-
Affymetrix HT Rat Focus Array	1391657_PM_at	-	-
Affymetrix HT Rat Focus Array	1371062_at	-	-
Affymetrix HT Rat Focus Array	1391657_at	-	-
Affymetrix HT Rat Focus Array	1371062_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1700004242.rn.1	TC1700000614.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1700004243.rn.1	TC1700000614.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1700004245.rn.1	TC1700000614.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1700004244.rn.1	TC1700000614.rn.1	RTA TC
Rat Expression Set 230	1371062_at	-	-
Rat Expression Set 230	1371062_PM_at	-	-
Rat Expression Set 230	1391657_PM_at	-	-
Rat Expression Set 230	1391657_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10795093	-	-
Rat Genome U34 Set	L34821_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21188599	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1372959	-	-
RatRef-12 Expression BeadChip	ILMN_56609	-	-