Rn01760089_g1

Gene Symbol:

LOC100911881 Chid1

Gene Name:

chitinase domain-containing protein 1-like

chitinase domain containing 1

Gene Aliases:

-

Cc1-9, RGD1308955

Chromosome Location:

Chr.1: 214039364 - 214074652 on Build Rnor_6.0

Chromosome Location:

Chr.1: 214476418 - 214511558 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: LOC100911881
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008760034.1	XP_008758256.1		1228		100
	XM_008760035.1	XP_008758257.1		1250		100

Gene Symbol: Chid1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001047854.2	NP_001041319.2	12 - 13	1154		100
GenBank mRNA	AY325242.1	-	16 - 17	1639		100
	BC127546.1	-	12 - 13	1154		100

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100006931.rn.1, TC0100006955.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

negative regulation of cytokine production involved in inflammatory response
carbohydrate metabolic process
chitin catabolic process
inflammatory response
innate immune response

Function(s)

oligosaccharide binding
chitinase activity
chitin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P153870	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	147915	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	669079	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	401213	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	485376	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	599235	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	391926	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	420674	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	864660	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	334084	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	948966	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	790535	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	472373	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	968063	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	339317	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	444802	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	130272	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	625600	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	850856	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	371793	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	722438	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	69401	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	949550	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	400194	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	926048	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	140299	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	148165	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	44001	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	22965	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P153870	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P153870	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P153870	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P231409	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	65189	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	6754	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	34659	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	55740	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10726861	-	-
Affymetrix Rat Gene 1.0 ST Array	10726862	-	-
Affymetrix Rat Gene 1.0 ST Array	10726876	-	-
Affymetrix Rat Gene 1.0 ST Array	10726866	-	-
Affymetrix Rat Gene 1.0 ST Array	10726877	-	-
Affymetrix Rat Gene 1.0 ST Array	10726875	-	-
Affymetrix Rat Gene 1.0 ST Array	10726863	-	-
Affymetrix Rat Gene 1.0 ST Array	10726874	-	-
Affymetrix Rat Gene 1.0 ST Array	10726870	-	-
Affymetrix Rat Gene 1.0 ST Array	10726867	-	-
Affymetrix Rat Gene 1.0 ST Array	10726871	-	-
Affymetrix Rat Gene 1.0 ST Array	10726873	-	-
Affymetrix Rat Gene 1.0 ST Array	10726872	-	-
Affymetrix Rat Gene 1.0 ST Array	10726864	-	-
Affymetrix Rat Gene 1.1 ST Array	10726860	-	-
Rat Genome 230 2.0 Array	1383152_at	-	-
Rat Genome 230 2.0 Array	1393828_PM_at	-	-
Rat Genome 230 2.0 Array	1383152_PM_at	-	-
Rat Genome 230 2.0 Array	1393828_at	-	-
Affymetrix HT Rat Focus Array	1383152_PM_at	-	-
Affymetrix HT Rat Focus Array	1383152_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100054604.rn.1	TC0100006931.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100054605.rn.1	TC0100006931.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100054902.rn.1	TC0100006955.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100054903.rn.1	TC0100006955.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100054901.rn.1	TC0100006955.rn.1	RTA TC
Rat Expression Set 230	1383152_at	-	-
Rat Expression Set 230	1393828_at	-	-
Rat Expression Set 230	1383152_PM_at	-	-
Rat Expression Set 230	1393828_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10726860	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1358283	-	-