Rn01760182_m1 Best Coverage

• Gene Symbol: Ssh3
• Gene Name: slingshot protein phosphatase 3
• Gene Aliases: -
• Chromosome Location: Chr.1: 219511908 - 219519398 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ssh3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001012217.1	NP_001012217.1	13 - 14	1756		87
GenBank mRNA	BC083600.1	-	13 - 14	1756	7133065	87

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100007066.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Protein Phosphatase, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ssh3

Panther Classification:

Molecular Function -

protein phosphatase

Gene Ontology Categories:

Process(es)

protein dephosphorylation
regulation of actin polymerization or depolymerization
regulation of lamellipodium assembly
peptidyl-tyrosine dephosphorylation
regulation of axonogenesis

Function(s)

DNA binding
actin binding
protein tyrosine phosphatase activity
protein tyrosine/serine/threonine phosphatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P805210	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	55477	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	155742	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	164106	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	733530	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	898481	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	585051	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	447337	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	28927	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	21992	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P805210	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P805210	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P805210	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P22242	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P805210	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	85605	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	94461	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10727508	-	-
Affymetrix Rat Gene 1.0 ST Array	10727511	-	-
Affymetrix Rat Gene 1.0 ST Array	10727519	-	-
Affymetrix Rat Gene 1.0 ST Array	10727515	-	-
Affymetrix Rat Gene 1.0 ST Array	10727506	-	-
Affymetrix Rat Gene 1.0 ST Array	10727513	-	-
Affymetrix Rat Gene 1.0 ST Array	10727510	-	-
Affymetrix Rat Gene 1.0 ST Array	10727516	-	-
Affymetrix Rat Gene 1.0 ST Array	10727514	-	-
Affymetrix Rat Gene 1.0 ST Array	10727517	-	-
Affymetrix Rat Gene 1.0 ST Array	10727509	-	-
Affymetrix Rat Gene 1.0 ST Array	10727512	-	-
Affymetrix Rat Gene 1.0 ST Array	10727507	-	-
Affymetrix Rat Gene 1.0 ST Array	10727518	-	-
Affymetrix Rat Gene 1.1 ST Array	10727505	-	-
Rat Genome 230 2.0 Array	1383138_at	-	-
Rat Genome 230 2.0 Array	1383138_PM_at	-	-
Affymetrix HT Rat Focus Array	1383138_at	-	-
Affymetrix HT Rat Focus Array	1383138_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100056202.rn.1	TC0100007066.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100056201.rn.1	TC0100007066.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100056206.rn.1	TC0100007066.rn.1	RTA TC
Rat Expression Set 230	1383138_PM_at	-	-
Rat Expression Set 230	1383138_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10727505	-	-
Rat Genome U34 Set	rc_AA800795_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20713371	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376807	-	-