Rn01760597_g1

• Gene Symbol: Taf7
• Gene Name: TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor
• Gene Aliases: -
• Chromosome Location: Chr.18: 30779149 - 30781297 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Taf7
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107394.2	NP_001100864.1	1 - 2	229		71
GenBank mRNA	BC158715.1	-	1 - 2	229		71

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1800001288.rn.1

Additional Information:

This assay is in the 5'UTR region of the BC158715.1, NM_001107394.2 transcripts.

• Set Membership: Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
DNA-templated transcription, initiation
regulation of transcription by RNA polymerase II
transcription by RNA polymerase II
transcription initiation from RNA polymerase II promoter
negative regulation of protein kinase activity
biological_process
intracellular estrogen receptor signaling pathway
negative regulation of histone acetylation
negative regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II

Function(s)

transcription cis-regulatory region binding
molecular_function
DNA-binding transcription factor activity
transcription coactivator activity
transcription factor binding
histone acetyltransferase binding
vitamin D receptor binding
thyroid hormone receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P527556	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	321319	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P527556	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P527556	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P527556	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P527556	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10804016	-	-
Affymetrix Rat Gene 1.1 ST Array	10804015	-	-
Rat Genome 230 2.0 Array	1379735_PM_at	-	-
Rat Genome 230 2.0 Array	1379735_at	-	-
Affymetrix Rat Clariom S Assay	PSR1800009188.rn.1	TC1800001288.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800009189.rn.1	TC1800001288.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800009187.rn.1	TC1800001288.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10804015	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1358227	-	-