Rn01762435_g1

• Gene Symbol: Calr
• Gene Name: calreticulin
• Gene Aliases: -
• Chromosome Location: Chr.19: 25956771 - 25961666 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Calr
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022399.2	NP_071794.1	4 - 5	550		76
GenBank mRNA	BC062395.1	-	4 - 5	527	5623178	76
	BU671467.1	-	4 - 5	550		76
	D78308.1	-	4 - 5	502		76
	FQ210587.1	-		555		76
	FQ220096.1	-	4 - 5	556		76
	X53363.1	-	4 - 5	522		76
	X79327.1	-	4 - 5	500		76

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1900001210.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Calr

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
peptide antigen assembly with MHC class I protein complex
protein folding
protein export from nucleus
cell cycle arrest
spermatogenesis
positive regulation of cell proliferation
response to organic substance
positive regulation of gene expression
negative regulation of translation
cortical actin cytoskeleton organization
response to estradiol
negative regulation of intracellular steroid hormone receptor signaling pathway
response to testosterone
protein localization to nucleus
regulation of meiotic nuclear division
response to drug
negative regulation of neuron differentiation
positive regulation of DNA replication
positive regulation of cell cycle
negative regulation of transcription, DNA-templated
negative regulation of retinoic acid receptor signaling pathway
positive regulation of phagocytosis
protein stabilization
cardiac muscle cell differentiation
chaperone-mediated protein folding
cellular response to lithium ion
cellular response to organic substance
cellular senescence
positive regulation of substrate adhesion-dependent cell spreading
positive regulation of dendritic cell chemotaxis

Function(s)

glycoprotein binding
mRNA binding
integrin binding
iron ion binding
calcium ion binding
protein binding
carbohydrate binding
ubiquitin protein ligase binding
peptide binding
hormone binding
poly(A) RNA binding
androgen receptor binding
unfolded protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1900009834.rn.1	TC1900001210.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1900009833.rn.1	TC1900001210.rn.1	RTA TC