Rn01762838_m1 Best Coverage

• Gene Symbol: Sec22b
• Gene Name: SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
• Gene Aliases: Sec22l1
• Chromosome Location: Chr.2: 200076079 - 200096861 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sec22b
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001025686.1	NP_001020857.1	4 - 5	595		79
GenBank mRNA	BC098725.1	-	4 - 5	595	7378284	79
	FQ211503.1	-		620		79

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200001799.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sec22b

Gene Ontology Categories:

Process(es)

exocytosis
ER to Golgi vesicle-mediated transport
protein transport
vesicle-mediated transport
regulation of organelle organization
positive regulation of protein catabolic process
vesicle fusion with Golgi apparatus

Function(s)

SNAP receptor activity
syntaxin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P017625	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	59496	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	378184	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	314772	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	489973	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	730943	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	616940	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	671748	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	870915	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	209432	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	52366	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	804586	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	722711	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	887476	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	98733	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	679315	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	197298	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	43230	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	8968	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P017625	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P017625	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P017625	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P228599	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	80445	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	65671	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	92620	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10817708	-	-
Affymetrix Rat Gene 1.0 ST Array	10817706	-	-
Affymetrix Rat Gene 1.0 ST Array	10817710	-	-
Affymetrix Rat Gene 1.0 ST Array	10817707	-	-
Affymetrix Rat Gene 1.0 ST Array	10817709	-	-
Affymetrix Rat Gene 1.1 ST Array	10817705	-	-
Rat Genome 230 2.0 Array	1377691_PM_at	-	-
Rat Genome 230 2.0 Array	1377691_at	-	-
Affymetrix HT Rat Focus Array	1377691_at	-	-
Affymetrix HT Rat Focus Array	1377691_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200012258.rn.1	TC0200001799.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200012259.rn.1	TC0200001799.rn.1	RTA TC
Rat Expression Set 230	1377691_PM_at	-	-
Rat Expression Set 230	1377691_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10817705	-	-
Rat Genome U34 Set	rc_AA848780_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20773699	-	-
ABI Rat Genome Survey Microarray	22289969	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1350093	-	-