Rn01766338_m1 Best Coverage

• Gene Symbol: Dpcd
• Gene Name: deleted in primary ciliary dyskinesia
• Gene Aliases: RGD1307648
• Chromosome Location: Chr.1: 265298880 - 265318521 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Dpcd
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001013905.1	NP_001013927.1	2 - 3	172		85
	XM_006231450.2	XP_006231512.1	2 - 3	202		85
GenBank mRNA	BC078988.1	-	2 - 3	172	7112530	85

More Information

Additional Information:

This assay is in the 5'UTR region of the BC078988.1, NM_001013905.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Dpcd

Gene Ontology Categories:

Process(es)

epithelial cilium movement
spermatogenesis
determination of left/right symmetry
ventricular system development
lateral ventricle development
third ventricle development
sperm motility
left/right pattern formation

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P161413	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	626254	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	567599	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	662076	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	540447	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	338226	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	325679	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	162716	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	27968	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	389423	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	724849	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	347882	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	781513	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	829895	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	441701	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	150791	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	15893	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	20760	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P161413	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P161413	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P161413	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P10249	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	26502	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	85308	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	51229	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10715701	-	-
Affymetrix Rat Gene 1.0 ST Array	10715703	-	-
Affymetrix Rat Gene 1.0 ST Array	10715698	-	-
Affymetrix Rat Gene 1.0 ST Array	10715700	-	-
Affymetrix Rat Gene 1.0 ST Array	10715702	-	-
Affymetrix Rat Gene 1.0 ST Array	10715699	-	-
Affymetrix Rat Gene 1.1 ST Array	10715697	-	-
Rat Genome 230 2.0 Array	1374358_at	-	-
Rat Genome 230 2.0 Array	1377431_PM_at	-	-
Rat Genome 230 2.0 Array	1374358_PM_at	-	-
Rat Genome 230 2.0 Array	1377431_at	-	-
Affymetrix HT Rat Focus Array	1377431_PM_at	-	-
Affymetrix HT Rat Focus Array	1374358_PM_at	-	-
Affymetrix HT Rat Focus Array	1377431_at	-	-
Affymetrix HT Rat Focus Array	1374358_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100030240.rn.1	TC0100003711.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100030236.rn.1	TC0100003711.rn.1	RTA TC
Rat Expression Set 230	1374358_PM_at	-	-
Rat Expression Set 230	1374358_at	-	-
Rat Expression Set 230	1377431_at	-	-
Rat Expression Set 230	1377431_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10715697	-	-
Rat Genome U34 Set	rc_AA956318_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21280748	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1373961	-	-