Rn01767057_m1

• Gene Symbol: Atg5
• Gene Name: autophagy related 5
• Gene Aliases: -
• Chromosome Location: Chr.20: 49301783 - 49393147 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atg5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001014250.1	NP_001014272.1		174		106
GenBank mRNA	AM087012.1	-		174		106
	BC083602.1	-		174	7133143	106

More Information

Additional Information:

This assay is in the 5'UTR region of the AM087012.1, BC083602.1, NM_001014250.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Apoptosis, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atg5

Panther Classification:

Molecular Function -

membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

autophagosome assembly
mitophagy
blood vessel remodeling
regulation of cytokine secretion involved in immune response
C-terminal protein lipidation
autophagy
apoptotic process
cellular response to nitrogen starvation
response to fungus
negative regulation of protein ubiquitination
negative stranded viral RNA replication
vasodilation
response to drug
negative regulation of apoptotic process
post-translational protein modification
nucleophagy
innate immune response
otolith development
regulation of release of sequestered calcium ion into cytosol
ventricular cardiac muscle cell development
heart contraction
positive regulation of mucus secretion
regulation of cilium assembly
regulation of reactive oxygen species metabolic process
negative regulation of histone H4-K16 acetylation

Function(s)

protein binding
Atg8 ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR2000007294.rn.1	TC2000000873.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000007303.rn.1	TC2000000873.rn.1	RTA TC