Rn01768052_g1 Best Coverage

• Gene Symbol: Shmt2
• Gene Name: serine hydroxymethyltransferase 2 (mitochondrial)
• Gene Aliases: -
• Chromosome Location: Chr.7: 70824719 - 70829824 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Shmt2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001008322.1	NP_001008323.1	5 - 6	654		65
	XM_006241453.2	XP_006241515.1	5 - 6	680		65
GenBank mRNA	BC085331.1	-	5 - 6	654	7106911	65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700002923.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Shmt2

Panther Classification:

Molecular Function -

methyltransferase

Gene Ontology Categories:

Process(es)

glycine metabolic process
glycine biosynthetic process
L-serine metabolic process
L-serine biosynthetic process
one-carbon metabolic process
positive regulation of cell proliferation
glycine biosynthetic process from serine
methylation
tetrahydrofolate interconversion
protein homotetramerization

Function(s)

chromatin binding
glycine hydroxymethyltransferase activity
methyltransferase activity
L-allo-threonine aldolase activity
amino acid binding
pyridoxal phosphate binding
identical protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0700022615.rn.1	TC0700002923.rn.1	RTA TC