Rn01768066_g1 Best Coverage

• Gene Symbol: Apol9a
• Gene Name: apolipoprotein L 9a
• Gene Aliases: -
• Chromosome Location: Chr.7: 118927012 - 118933778 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Apol9a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001025066.1	NP_001020237.1	2 - 3	268		79
	XM_008765643.1	XP_008763865.1	2 - 3	918		79
GenBank mRNA	BC083768.1	-	2 - 3	268	7193209	79

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700003437.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Transporter, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apol9a

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Process(es)

lipid transport
lipoprotein metabolic process

Function(s)

lipid binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P111893	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	730315	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	392155	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	200956	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	413064	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	21636	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P111893	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P111893	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P111893	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P150017	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P110352	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	15349	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10905181	-	-
Affymetrix Rat Gene 1.0 ST Array	10905180	-	-
Affymetrix Rat Gene 1.0 ST Array	10905182	-	-
Affymetrix Rat Gene 1.1 ST Array	10905179	-	-
Rat Genome 230 2.0 Array	1376496_PM_at	-	-
Rat Genome 230 2.0 Array	1376496_at	-	-
Affymetrix HT Rat Focus Array	1376496_PM_at	-	-
Affymetrix HT Rat Focus Array	1376496_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700026922.rn.1	TC0700003437.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700026923.rn.1	TC0700003437.rn.1	RTA TC
Rat Expression Set 230	1376496_at	-	-
Rat Expression Set 230	1376496_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10905179	-	-
Rat Genome U34 Set	rc_AI070325_at	-	-
Rat Genome U34 Set	rc_AI227809_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21071612	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352829	-	-