Rn01773410_mH Best Coverage

• Gene Symbol: Ptpmt1
• Gene Name: protein tyrosine phosphatase, mitochondrial 1
• Gene Aliases: Plip
• Chromosome Location: Chr.3: 79734961 - 79743737 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ptpmt1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001105726.1	NP_001099196.1	3 - 4	1040		150
GenBank mRNA	FQ219112.1	-	3 - 4	680		150

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300003643.rn.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

protein dephosphorylation
dephosphorylation
cardiolipin biosynthetic process
peptidyl-tyrosine dephosphorylation
inositol phosphate dephosphorylation

Function(s)

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
protein tyrosine phosphatase activity
protein tyrosine/serine/threonine phosphatase activity
phosphatidylglycerophosphatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P130763	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	672517	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	490609	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	705905	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	766583	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	663848	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	770549	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	131588	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P130763	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P130763	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P130763	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P454847	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10847292	-	-
Affymetrix Rat Gene 1.0 ST Array	10847293	-	-
Affymetrix Rat Gene 1.0 ST Array	10847295	-	-
Affymetrix Rat Gene 1.0 ST Array	10847294	-	-
Affymetrix Rat Gene 1.1 ST Array	10847291	-	-
Affymetrix Rat Clariom S Assay	PSR0300027621.rn.1	TC0300003643.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300027629.rn.1	TC0300003643.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300027619.rn.1	TC0300003643.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300027622.rn.1	TC0300003643.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300027626.rn.1	TC0300003643.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300027620.rn.1	TC0300003643.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300027624.rn.1	TC0300003643.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300027628.rn.1	TC0300003643.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10847291	-	-
Rat Genome U34 Set	rc_AI228599_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20810831	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1354391	-	-