Rn01774752_m1 Best Coverage

• Gene Symbol: Sox7
• Gene Name: SRY (sex determining region Y)-box 7
• Gene Aliases: -
• Chromosome Location: Chr.15: 47293699 - 47300460 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sox7
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001106045.1	NP_001099515.1	1 - 2	313		118

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1500000710.rn.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

HMG box transcription factor

Gene Ontology Categories:

Process(es)

endoderm formation
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
biological_process
negative regulation of cell proliferation
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
regulation of canonical Wnt signaling pathway

Function(s)

molecular_function
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
sequence-specific DNA binding
transcription regulatory region DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P116710	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P592221	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	180114	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	460497	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	535317	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	934270	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	504002	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P116710	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P592221	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P116710	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P592221	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P592221	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P116710	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P436115	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10781024	-	-
Affymetrix Rat Gene 1.0 ST Array	10781023	-	-
Affymetrix Rat Gene 1.1 ST Array	10781022	-	-
Rat Genome 230 2.0 Array	1384415_at	-	-
Rat Genome 230 2.0 Array	1384415_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1500004924.rn.1	TC1500000710.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1500004925.rn.1	TC1500000710.rn.1	RTA TC
Rat Expression Set 230	1384415_at	-	-
Rat Expression Set 230	1384415_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10781022	-	-
Rat Genome U34 Set	rc_AI011503_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21948904	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1353561	-	-