Rn02103243_s1 Best Coverage

• Gene Symbol: Degs1
• Gene Name: delta(4)-desaturase, sphingolipid 1
• Gene Aliases: Degs
• Chromosome Location: Chr.13: 100665265 - 100672731 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Degs1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053323.2	NP_445775.2	2	603		153
	XM_006250403.2	XP_006250465.1	2	898		153
	XM_006250404.2	XP_006250466.1	2	844		153
GenBank mRNA	AJ938081.1	-	2	556		153
	AY036902.1	-	2			153
	BC083727.1	-	2	603	7191263	153
	FQ225269.1	-	2	611		153

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Degs1

Panther Classification:

Molecular Function -

hydroxylase

Gene Ontology Categories:

Process(es)

fatty acid biosynthetic process
sphingolipid biosynthetic process
positive regulation of apoptotic process
ceramide biosynthetic process
oxidation-reduction process

Function(s)

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
sphingolipid delta-4 desaturase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P12764	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	932466	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	151920	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	537418	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	803705	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	359999	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	12568	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12764	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12764	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P12764	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P12764	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	90221	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10770432	-	-
Affymetrix Rat Gene 1.0 ST Array	10770431	-	-
Affymetrix Rat Gene 1.0 ST Array	10770433	-	-
Affymetrix Rat Gene 1.1 ST Array	10770430	-	-
Rat Genome 230 2.0 Array	1367770_at	-	-
Rat Genome 230 2.0 Array	1391406_at	-	-
Rat Genome 230 2.0 Array	1381384_PM_at	-	-
Rat Genome 230 2.0 Array	1367770_PM_at	-	-
Rat Genome 230 2.0 Array	1381384_at	-	-
Rat Genome 230 2.0 Array	1386022_at	-	-
Rat Genome 230 2.0 Array	1391406_PM_at	-	-
Rat Genome 230 2.0 Array	1386022_PM_at	-	-
Affymetrix HT Rat Focus Array	1367770_PM_at	-	-
Affymetrix HT Rat Focus Array	1367770_at	-	-
Affymetrix Rat Clariom S Assay	PSR1300015009.rn.1	TC1300002104.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300015011.rn.1	TC1300002104.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300015016.rn.1	TC1300002104.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300015012.rn.1	TC1300002104.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300015024.rn.1	TC1300002104.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300015017.rn.1	TC1300002104.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300015018.rn.1	TC1300002104.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300015008.rn.1	TC1300002104.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300015013.rn.1	TC1300002104.rn.1	RTA TC
Rat Expression Set 230	1367770_at	-	-
Rat Expression Set 230	1367770_PM_at	-	-
Rat Expression Set 230	1386022_at	-	-
Rat Expression Set 230	1386022_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10770430	-	-
Rat Genome U34 Set	rc_AI177412_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22292871	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376704	-	-