Rn02112959_s1

• Gene Symbol: C1d
• Gene Name: C1D nuclear receptor co-repressor
• Gene Aliases: RGD1560600
• Chromosome Location: Chr.14: 100415645 - 100427878 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: C1d
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001106021.1	NP_001099491.1	5	3068		95

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400001055.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Rattus norvegicus, 1700, Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

maturation of 5.8S rRNA
negative regulation of transcription, DNA-templated

Function(s)

DNA binding
transcription corepressor activity
RNA binding
nuclear receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P077085	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P093382	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	506517	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	853025	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	812266	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	875055	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	498734	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	678356	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	351121	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	295078	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	242240	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	327934	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	19336	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P093382	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P716856	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P716856	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P093382	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P093382	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P716856	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P457008	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P14774	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10774335	-	-
Affymetrix Rat Gene 1.0 ST Array	10774332	-	-
Affymetrix Rat Gene 1.0 ST Array	10774333	-	-
Affymetrix Rat Gene 1.0 ST Array	10774334	-	-
Affymetrix Rat Gene 1.0 ST Array	10774336	-	-
Affymetrix Rat Gene 1.1 ST Array	10774331	-	-
Rat Genome 230 2.0 Array	1377731_at	-	-
Rat Genome 230 2.0 Array	1397387_PM_at	-	-
Rat Genome 230 2.0 Array	1397387_at	-	-
Rat Genome 230 2.0 Array	1377731_PM_at	-	-
Affymetrix HT Rat Focus Array	1377731_at	-	-
Affymetrix HT Rat Focus Array	1377731_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1400007699.rn.1	TC1400001055.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400007707.rn.1	TC1400001055.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400007706.rn.1	TC1400001055.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400007705.rn.1	TC1400001055.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400007711.rn.1	TC1400001055.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400007709.rn.1	TC1400001055.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400007704.rn.1	TC1400001055.rn.1	RTA TC
Rat Expression Set 230	1377731_PM_at	-	-
Rat Expression Set 230	1377731_at	-	-
Rat Expression Set 230	1397387_PM_at	-	-
Rat Expression Set 230	1397387_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10774331	-	-
Rat Genome U34 Set	rc_AA891969_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21182395	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1370432	-	-