Rn02132880_s1 Best Coverage

• Gene Symbol: Cxcr5
• Gene Name: chemokine (C-X-C motif) receptor 5
• Gene Aliases: Blr1, NLR
• Chromosome Location: Chr.8: 48835688 - 48852038 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cxcr5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053303.1	NP_445755.1	2	1039		146
	XM_006242901.2	XP_006242963.1	3	1662		146

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800002418.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, G-protein coupled receptor, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cxcr5

Gene Ontology Categories:

Process(es)

chemotaxis
immune response
G protein-coupled receptor signaling pathway
positive regulation of cytokinesis
B cell activation
lymph node development
chemokine-mediated signaling pathway

Function(s)

C-X-C chemokine receptor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P119981	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P119981	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P119981	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P119981	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P15579	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10916823	-	-
Affymetrix Rat Gene 1.1 ST Array	10916822	-	-
Rat Genome 230 2.0 Array	1369911_at	-	-
Rat Genome 230 2.0 Array	1369911_PM_at	-	-
Affymetrix HT Rat Focus Array	1369911_at	-	-
Affymetrix HT Rat Focus Array	1369911_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0800019308.rn.1	TC0800002418.rn.1	RTA TC
Rat Expression Set 230	1369911_at	-	-
Rat Expression Set 230	1369911_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10916822	-	-
Rat Genome U34 Set	X71463_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21867394	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357073	-	-
RatRef-12 Expression BeadChip	ILMN_58082	-	-