Rn02133709_s1 Best Coverage

• Gene Symbol: Clcf1
• Gene Name: cardiotrophin-like cytokine factor 1
• Gene Aliases: Bsf3, Clc, NNT-1
• Chromosome Location: Chr.1: 219468866 - 219472445 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Clcf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_207615.2	NP_997498.2	2	593		168
GenBank mRNA	AY365006.1	-	2	340		168
	BC098643.1	-	2	593	7123848	168

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Clcf1

Gene Ontology Categories:

Process(es)

positive regulation of immunoglobulin production
cell surface receptor signaling pathway
JAK-STAT cascade
positive regulation of cell proliferation
B cell differentiation
positive regulation of B cell proliferation
positive regulation of tyrosine phosphorylation of Stat3 protein
negative regulation of neuron apoptotic process
positive regulation of isotype switching to IgE isotypes
positive regulation of astrocyte differentiation

Function(s)

receptor binding
cytokine activity
ciliary neurotrophic factor receptor binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P024099	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	712209	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	209195	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P809374	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P809374	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P809374	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P233702	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P809374	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	9354	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10712856	-	-
Affymetrix Rat Gene 1.0 ST Array	10712857	-	-
Affymetrix Rat Gene 1.0 ST Array	10712854	-	-
Affymetrix Rat Gene 1.0 ST Array	10712855	-	-
Affymetrix Rat Gene 1.1 ST Array	10712853	-	-
Rat Genome 230 2.0 Array	1385827_at	-	-
Rat Genome 230 2.0 Array	1385827_PM_at	-	-
Affymetrix HT Rat Focus Array	1385827_at	-	-
Affymetrix HT Rat Focus Array	1385827_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100024286.rn.1	TC0100003003.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100024284.rn.1	TC0100003003.rn.1	RTA TC
Rat Expression Set 230	1385827_PM_at	-	-
Rat Expression Set 230	1385827_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10712853	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21921832	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1355034	-	-
RatRef-12 Expression BeadChip	ILMN_59913	-	-