Rn02346965_g1

• Gene Symbol: Trim25
• Gene Name: tripartite motif-containing 25
• Gene Aliases: Efp, Znf147
• Chromosome Location: Chr.10: 76343847 - 76362159 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Trim25
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001009536.1	NP_001009536.1	7 - 8	1365		161
GenBank mRNA	BC061749.1	-	7 - 8	1365	5599464	161

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000001372.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Trim25

Gene Ontology Categories:

Process(es)

response to vitamin D
positive regulation of I-kappaB kinase/NF-kappaB signaling
response to estrogen
innate immune response
regulation of viral entry into host cell
negative regulation of viral entry into host cell
positive regulation of sequence-specific DNA binding transcription factor activity
positive regulation of NF-kappaB transcription factor activity
regulation of viral release from host cell
negative regulation of viral release from host cell

Function(s)

molecular_function
zinc ion binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P318466	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	17098	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	346450	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	693346	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	54867	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	815477	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	77055	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	294724	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	434596	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	899077	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	681838	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	423953	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	918201	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	159179	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	28855	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P318466	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P318466	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P318466	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P318466	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	64086	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	44091	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10737419	-	-
Affymetrix Rat Gene 1.0 ST Array	10737412	-	-
Affymetrix Rat Gene 1.0 ST Array	10737420	-	-
Affymetrix Rat Gene 1.0 ST Array	10737413	-	-
Affymetrix Rat Gene 1.0 ST Array	10737415	-	-
Affymetrix Rat Gene 1.0 ST Array	10737417	-	-
Affymetrix Rat Gene 1.0 ST Array	10737414	-	-
Affymetrix Rat Gene 1.0 ST Array	10737421	-	-
Affymetrix Rat Gene 1.0 ST Array	10737418	-	-
Affymetrix Rat Gene 1.0 ST Array	10737416	-	-
Affymetrix Rat Gene 1.1 ST Array	10737411	-	-
Rat Genome 230 2.0 Array	1377726_at	-	-
Rat Genome 230 2.0 Array	1377726_PM_at	-	-
Affymetrix HT Rat Focus Array	1377726_PM_at	-	-
Affymetrix HT Rat Focus Array	1377726_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000012586.rn.1	TC1000001372.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000012587.rn.1	TC1000001372.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000012585.rn.1	TC1000001372.rn.1	RTA TC
Rat Expression Set 230	1377726_PM_at	-	-
Rat Expression Set 230	1377726_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10737411	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1351248	-	-
RatRef-12 Expression BeadChip	ILMN_65283	-	-