Rn02347054_g1 Best Coverage

• Gene Symbol: Sub1
• Gene Name: SUB1 homolog (S. cerevisiae)
• Gene Aliases: Rpo2tc1
• Chromosome Location: Chr.2: 62019902 - 62034702 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sub1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001009618.1	NP_001009618.1	3 - 4	310		112
	XM_006232043.2	XP_006232105.1	3 - 4	277		112
GenBank mRNA	BC088346.1	-	3 - 4	310	7368325	112
	FQ211681.1	-	3 - 4	267		112
	FQ211748.1	-	3 - 4	267		112
	FQ230867.1	-	3 - 4	240		112
	FQ232387.1	-	3 - 4	239		112

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sub1

Panther Classification:

Molecular Function -

general transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
biological_process
positive regulation of transcription from RNA polymerase II promoter
SMAD protein signal transduction

Function(s)

transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
molecular_function
single-stranded DNA binding
transcription coactivator activity
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1026398	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	689935	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	199160	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	25313	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	281655	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	526686	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	943789	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	287694	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	620501	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	941428	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	78070	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1026398	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1026398	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1026398	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1026398	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	702031465	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	68422	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	59875	-	-
Agilent Rat cDNA Microarray (G4105A)	702031465	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10822001	-	-
Affymetrix Rat Gene 1.0 ST Array	10822003	-	-
Affymetrix Rat Gene 1.0 ST Array	10822002	-	-
Affymetrix Rat Gene 1.0 ST Array	10822004	-	-
Affymetrix Rat Gene 1.1 ST Array	10822000	-	-
Rat Genome 230 2.0 Array	1398880_PM_at	-	-
Rat Genome 230 2.0 Array	1398880_at	-	-
Affymetrix HT Rat Focus Array	1398880_PM_at	-	-
Affymetrix HT Rat Focus Array	1398880_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200021634.rn.1	TC0200003086.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021635.rn.1	TC0200003086.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021640.rn.1	TC0200003086.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021633.rn.1	TC0200003086.rn.1	RTA TC
Rat Expression Set 230	1398880_PM_at	-	-
Rat Expression Set 230	1398880_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10822000	-	-
Rat Genome U34 Set	K02816_g_at	-	-
Rat Genome U34 Set	K02816_at	-	-
Rat Genome U34 Set	rc_AA955197_i_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20805519	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357572	-	-
RatRef-12 Expression BeadChip	ILMN_48474	-	-