Rn03035021_g1 Best Coverage

• Gene Symbol: Basp1
• Gene Name: brain abundant, membrane attached signal protein 1
• Gene Aliases: NAP22
• Chromosome Location: Chr.2: 77586424 - 77632626 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Basp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022300.1	NP_071636.1	2	743		90
GenBank mRNA	D14441.1	-	2	743		90

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200003148.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Basp1

Gene Ontology Categories:

Process(es)

negative regulation of transcription, DNA-templated

Function(s)

transcription cis-regulatory region binding
transcription corepressor activity
calmodulin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P012546	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	612622	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	370841	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	624764	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	785561	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	115815	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	594082	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	514238	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	417041	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	810017	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	684419	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	910289	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	268525	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	907784	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	602270	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	541049	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	428831	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	916224	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	688813	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	243118	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	929374	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	35428	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	765266	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	524912	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	617001	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	158599	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	434869	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	726172	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	309467	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	266787	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	783897	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	118398	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	1123	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	110403	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	107471	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P012546	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P012546	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P012546	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P12208	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700492970	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	34733	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	33893	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	8963	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	62874	-	-
Agilent Rat cDNA Microarray (G4105A)	700492970	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10822076	-	-
Affymetrix Rat Gene 1.0 ST Array	10822077	-	-
Affymetrix Rat Gene 1.1 ST Array	10822075	-	-
Rat Genome 230 2.0 Array	1398350_at	-	-
Rat Genome 230 2.0 Array	1398350_PM_at	-	-
Rat Genome 230 2.0 Array	1369310_at	-	-
Rat Genome 230 2.0 Array	1375143_PM_at	-	-
Rat Genome 230 2.0 Array	1369310_PM_at	-	-
Rat Genome 230 2.0 Array	1375143_at	-	-
Affymetrix HT Rat Focus Array	1375143_at	-	-
Affymetrix HT Rat Focus Array	1369310_PM_at	-	-
Affymetrix HT Rat Focus Array	1375143_PM_at	-	-
Affymetrix HT Rat Focus Array	1369310_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200021848.rn.1	TC0200003148.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021852.rn.1	TC0200003148.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021851.rn.1	TC0200003148.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021849.rn.1	TC0200003148.rn.1	RTA TC
Rat Expression Set 230	1375143_at	-	-
Rat Expression Set 230	1369310_PM_at	-	-
Rat Expression Set 230	1375143_PM_at	-	-
Rat Expression Set 230	1369310_at	-	-
Rat Expression Set 230	1398350_at	-	-
Rat Expression Set 230	1398350_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10822075	-	-
Rat Genome U34 Set	rc_AA859536_at	-	-
Rat Genome U34 Set	D14441_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21421497	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365368	-	-
RatRef-12 Expression BeadChip	ILMN_68430	-	-