Rn03416132_g1 Best Coverage

• Gene Symbol: Rpa3
• Gene Name: replication protein A3
• Gene Aliases: -
• Chromosome Location: Chr.4: 34279320 - 34282351 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rpa3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001106584.1	NP_001100054.1	1 - 2	131		112
GenBank mRNA	FQ228706.1	-	1 - 2	119		112

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400002443.rn.1

• Set Membership: Amplicon length greater than or equal to 101, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

double-strand break repair via homologous recombination
DNA replication
DNA repair
base-excision repair
nucleotide-excision repair
mismatch repair
DNA recombination
regulation of mitotic cell cycle
regulation of cell population proliferation

Function(s)

DNA binding
damaged DNA binding
single-stranded DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P16625	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	3543	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	53917	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	240794	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P16625	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P16625	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P16625	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P16625	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10762982	-	-
Affymetrix Rat Gene 1.0 ST Array	10860997	-	-
Affymetrix Rat Gene 1.0 ST Array	10860999	-	-
Affymetrix Rat Gene 1.0 ST Array	10861000	-	-
Affymetrix Rat Gene 1.0 ST Array	10860998	-	-
Affymetrix Rat Gene 1.1 ST Array	10860996	-	-
Affymetrix Rat Gene 1.1 ST Array	10762981	-	-
Rat Genome 230 2.0 Array	1398308_at	-	-
Rat Genome 230 2.0 Array	1398308_PM_at	-	-
Affymetrix HT Rat Focus Array	1398308_at	-	-
Affymetrix HT Rat Focus Array	1398308_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400017416.rn.1	TC0400002443.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400017418.rn.1	TC0400002443.rn.1	RTA TC
Rat Expression Set 230	1398308_at	-	-
Rat Expression Set 230	1398308_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10860996	-	-
Affymetrix Rat Gene 1.0 ST Array	10762981	-	-
Rat Genome U34 Set	rc_AI171243_at	-	-
Rat Genome U34 Set	rc_AI171243_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20996510	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1366297	-	-