Rn03416162_m1

• Gene Symbol: Prdm1
• Gene Name: PR domain containing 1, with ZNF domain
• Gene Aliases: -
• Chromosome Location: Chr.20: 49464921 - 49486545 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prdm1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107639.2	NP_001101109.2	4 - 5	887		61
	XM_008772991.1	XP_008771213.1	5 - 6	852		61

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000001752.rn.1

• Set Membership: Amplicon length less than or equal to 70, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
in utero embryonic development
embryonic placenta development
maternal placenta development
germ cell development
post-embryonic development
positive regulation of gene expression
negative regulation of gene expression
negative regulation of B cell proliferation
negative regulation of lipopolysaccharide-mediated signaling pathway
eye photoreceptor cell development
cell fate commitment
positive regulation of B cell differentiation
cellular developmental process
intestinal epithelial cell development
trophoblast giant cell differentiation

Function(s)

RNA polymerase II cis-regulatory region sequence-specific DNA binding
nucleic acid binding
DNA-binding transcription factor activity
histone deacetylase binding
sequence-specific DNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR2000014168.rn.1	TC2000001752.rn.1	RTA TC