Rn03652674_g1

• Gene Symbol: Gapdh-ps1
• Gene Name: glyceraldehyde-3-phosphate dehydrogenase, pseudogene 1
• Gene Aliases: -
• Chromosome Location: Chr.3: 44736647 - 44738545 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gapdh-ps1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_003722.1		1 - 2	155		75
GenBank mRNA	BC087069.1	-	1 - 2	155		75

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CK598450.1	-		154		Chr. - - [-] on Build	75

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	acanthoscurrin-1-like	LOC103691813		-184.5kb	Sense	Chr. 3 - 44548714 - 44552115 on NCBI Build Rnor_6.0
Downstream	uridine phosphorylase 2	Upp2		67.6kb	Sense	Chr. 3 - 44806106 - 44846464 on NCBI Build Rnor_6.0

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300000636.rn.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P005659	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P005659	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P005659	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P005659	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P511248	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P867760	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10836311	-	-
Affymetrix Rat Gene 1.0 ST Array	10836310	-	-
Affymetrix Rat Gene 1.1 ST Array	10836309	-	-
Affymetrix Rat Clariom S Assay	PSR0300004840.rn.1	TC0300000636.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300004841.rn.1	TC0300000636.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300004843.rn.1	TC0300000636.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300004844.rn.1	TC0300000636.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300004842.rn.1	TC0300000636.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300004845.rn.1	TC0300000636.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10836309	-	-