Rn04181298_s1 Best Coverage

• Gene Symbol: Sox12
• Gene Name: SRY (sex determining region Y)-box 12
• Gene Aliases: -
• Chromosome Location: Chr.3: 147864374 - 147865393 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sox12
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001168650.1	NP_001162121.1	1	554		107

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

HMG box transcription factor

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
spinal cord development
cell fate commitment
positive regulation of transcription from RNA polymerase II promoter
protein-DNA complex assembly

Function(s)

transcription regulatory region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription coactivator activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P399933	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P399933	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P399933	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P399933	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P399933	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.1 ST Array	10850787	-	-
Rat Genome 230 2.0 Array	1372005_PM_at	-	-
Rat Genome 230 2.0 Array	1385186_at	-	-
Rat Genome 230 2.0 Array	1372005_at	-	-
Rat Genome 230 2.0 Array	1385186_PM_at	-	-
Affymetrix HT Rat Focus Array	1372005_at	-	-
Affymetrix HT Rat Focus Array	1372005_PM_at	-	-
Affymetrix HT Rat Focus Array	1385186_at	-	-
Affymetrix HT Rat Focus Array	1385186_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300034346.rn.1	TC0300004474.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300034349.rn.1	TC0300004474.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300034348.rn.1	TC0300004474.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300034347.rn.1	TC0300004474.rn.1	RTA TC
Rat Expression Set 230	1372005_at	-	-
Rat Expression Set 230	1372005_PM_at	-	-
Rat Expression Set 230	1385186_PM_at	-	-
Rat Expression Set 230	1385186_at	-	-
Rat Genome U34 Set	rc_AA899642_at	-	-
Rat Genome U34 Set	rc_AI103638_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21853887	-	-