Rn04219739_m1

• Gene Symbol: Npc2
• Gene Name: Niemann-Pick disease, type C2
• Gene Aliases: re1
• Chromosome Location: Chr.6: 108467410 - 108488330 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Npc2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_173118.2	NP_775141.2	3 - 4	463		96
GenBank mRNA	AJ515237.1	-	3 - 4	398		96
	BC058132.1	-	3 - 4	426	6920130	96
	FQ214040.1	-	3 - 4	384		96
	FQ216545.1	-	3 - 4	388		96
	FQ219301.1	-	3 - 4	405		96
	FQ219863.1	-	3 - 4	396		96
	FQ220660.1	-	3 - 4	384		96
	FQ220919.1	-	3 - 4	390		96
	FQ228456.1	-	3 - 4	388		96
	FQ229422.1	-	3 - 4	443		96
	FQ229782.1	-	3 - 4	384		96
	FQ229783.1	-	3 - 4	386		96

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600002860.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Rattus norvegicus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Npc2

Gene Ontology Categories:

Process(es)

biological_process
response to virus
cholesterol transport
intracellular sterol transport
intracellular cholesterol transport
cholesterol efflux
cholesterol homeostasis

Function(s)

molecular_function
cholesterol binding
enzyme binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P139742	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	192789	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	924028	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	806312	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	468358	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	507339	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	30850	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	581154	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	121814	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	191753	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	835160	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	805623	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	564885	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	588586	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	956825	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	540129	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	557156	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	51652	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	82145	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	17392	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P139742	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P139742	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P139742	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P139742	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	10188	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	64493	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10891164	-	-
Affymetrix Rat Gene 1.0 ST Array	10891161	-	-
Affymetrix Rat Gene 1.0 ST Array	10891162	-	-
Affymetrix Rat Gene 1.0 ST Array	10891163	-	-
Affymetrix Rat Gene 1.1 ST Array	10891160	-	-
Rat Genome 230 2.0 Array	1398892_PM_at	-	-
Rat Genome 230 2.0 Array	1398892_at	-	-
Affymetrix HT Rat Focus Array	1398892_PM_at	-	-
Affymetrix HT Rat Focus Array	1398892_at	-	-
Affymetrix Rat Clariom S Assay	PSR0600020208.rn.1	TC0600002860.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600020210.rn.1	TC0600002860.rn.1	RTA TC
Rat Expression Set 230	1398892_PM_at	-	-
Rat Expression Set 230	1398892_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10891160	-	-
Rat Genome U34 Set	rc_AI231785_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22176686	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352122	-	-
RatRef-12 Expression BeadChip	ILMN_59161	-	-